Protein–RNA interactions for Protein: P47079

CCT8, T-complex protein 1 subunit theta, yeastyeast

Known RBP Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCT8P47079 APL3YBL037W 3078 nt1.65□□□□□ -2.15
CCT8P47079 NUP192YJL039C 5052 nt1.64□□□□□ -2.15
CCT8P47079 SPC110YDR356W 2835 nt1.64□□□□□ -2.15
CCT8P47079 YPL060C-AYPL060C-A 3315 nt1.63□□□□□ -2.15
CCT8P47079 FYV8YGR196C 2454 nt1.62□□□□□ -2.15
CCT8P47079 PMD1YER132C 5262 nt1.61□□□□□ -2.15
CCT8P47079 MSN5YDR335W 3675 nt1.58□□□□□ -2.16
CCT8P47079 tV(UAC)QtV(UAC)Q 76 nt1.58□□□□□ -2.16
CCT8P47079 SEC3YER008C 4011 nt1.58□□□□□ -2.16
CCT8P47079 TRM732YMR259C 4263 nt1.56□□□□□ -2.16
CCT8P47079 MEC1YBR136W 7107 nt1.54□□□□□ -2.16
CCT8P47079 CAT8YMR280C 4302 nt1.54□□□□□ -2.16
CCT8P47079 YER090C-AYER090C-A 90 nt1.54□□□□□ -2.16
CCT8P47079 YLL006W-AYLL006W-A 177 nt1.53□□□□□ -2.16
CCT8P47079 YNL054W-BYNL054W-B 5250 nt1.53□□□□□ -2.16
CCT8P47079 IRA1YBR140C 9279 nt1.53□□□□□ -2.17
CCT8P47079 HKR1YDR420W 5409 nt1.51□□□□□ -2.17
CCT8P47079 YKL106C-AYKL106C-A 120 nt1.5□□□□□ -2.17
CCT8P47079 CLU1YMR012W 3834 nt1.5□□□□□ -2.17
CCT8P47079 SWI4YER111C 3282 nt1.48□□□□□ -2.17
CCT8P47079 CCH1YGR217W 6120 nt1.47□□□□□ -2.17
CCT8P47079 snR67snR67 82 nt1.47□□□□□ -2.17
CCT8P47079 tQ(UUG)E2tQ(UUG)E2 72 nt1.47□□□□□ -2.17
CCT8P47079 NUP188YML103C 4968 nt1.46□□□□□ -2.18
CCT8P47079 SSK2YNR031C 4740 nt1.43□□□□□ -2.18
CCT8P47079 NUP145YGL092W 3954 nt1.43□□□□□ -2.18
CCT8P47079 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
CCT8P47079 CDC25YLR310C 4770 nt1.42□□□□□ -2.18
CCT8P47079 YMR160WYMR160W 2451 nt1.4□□□□□ -2.19
CCT8P47079 CDC39YCR093W 6327 nt1.36□□□□□ -2.19
CCT8P47079 YNL284C-BYNL284C-B 5268 nt1.34□□□□□ -2.19
CCT8P47079 BUD3YCL014W 4911 nt1.32□□□□□ -2.2
CCT8P47079 YGR130CYGR130C 2451 nt1.3□□□□□ -2.2
CCT8P47079 SPT7YBR081C 3999 nt1.26□□□□□ -2.21
CCT8P47079 YOR192C-BYOR192C-B 5313 nt1.26□□□□□ -2.21
CCT8P47079 VAM6YDL077C 3150 nt1.26□□□□□ -2.21
CCT8P47079 IML1YJR138W 4755 nt1.24□□□□□ -2.21
CCT8P47079 snR77snR77 88 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)E1tH(GUG)E1 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)E2tH(GUG)E2 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)G1tH(GUG)G1 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)G2tH(GUG)G2 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)HtH(GUG)H 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)KtH(GUG)K 72 nt1.23□□□□□ -2.21
CCT8P47079 tH(GUG)MtH(GUG)M 72 nt1.23□□□□□ -2.21
CCT8P47079 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
CCT8P47079 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
CCT8P47079 YPR117WYPR117W 7470 nt1.18□□□□□ -2.22
CCT8P47079 BEM2YER155C 6504 nt1.18□□□□□ -2.22
CCT8P47079 MLP2YIL149C 5040 nt1.16□□□□□ -2.22
CCT8P47079 RKR1YMR247C 4689 nt1.15□□□□□ -2.22
CCT8P47079 YOR316C-AYOR316C-A 210 nt1.12□□□□□ -2.23
CCT8P47079 SOV1YMR066W 2697 nt1.11□□□□□ -2.23
CCT8P47079 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
CCT8P47079 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
CCT8P47079 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
CCT8P47079 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
CCT8P47079 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
CCT8P47079 LTE1YAL024C 4308 nt1.08□□□□□ -2.24
CCT8P47079 SBH2YER019C-A 267 nt1.08□□□□□ -2.24
CCT8P47079 YJR029WYJR029W 5268 nt1.08□□□□□ -2.24
CCT8P47079 YPR137C-BYPR137C-B 5268 nt1.08□□□□□ -2.24
CCT8P47079 DOP1YDR141C 5097 nt1.07□□□□□ -2.24
CCT8P47079 SCC2YDR180W 4482 nt1.06□□□□□ -2.24
CCT8P47079 THO2YNL139C 4794 nt1.05□□□□□ -2.24
CCT8P47079 PAU24YBR301W 363 nt0.97□□□□□ -2.25
CCT8P47079 YBL100W-BYBL100W-B 5313 nt0.95□□□□□ -2.26
CCT8P47079 UTP20YBL004W 7482 nt0.95□□□□□ -2.26
CCT8P47079 YML100W-AYML100W-A 174 nt0.92□□□□□ -2.26
CCT8P47079 tF(GAA)BtF(GAA)B 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)FtF(GAA)F 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)GtF(GAA)G 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)H1tF(GAA)H1 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)H2tF(GAA)H2 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)MtF(GAA)M 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)P1tF(GAA)P1 73 nt0.84□□□□□ -2.27
CCT8P47079 tF(GAA)P2tF(GAA)P2 73 nt0.84□□□□□ -2.27
CCT8P47079 tC(GCA)QtC(GCA)Q 76 nt0.79□□□□□ -2.28
CCT8P47079 ESP1YGR098C 4893 nt0.77□□□□□ -2.29
CCT8P47079 PAU9YBL108C-A 129 nt0.75□□□□□ -2.29
CCT8P47079 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
CCT8P47079 YOR186C-AYOR186C-A 210 nt0.74□□□□□ -2.29
CCT8P47079 tT(AGU)BtT(AGU)B 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)CtT(AGU)C 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)DtT(AGU)D 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)HtT(AGU)H 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)I1tT(AGU)I1 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)I2tT(AGU)I2 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)JtT(AGU)J 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)N1tT(AGU)N1 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)N2tT(AGU)N2 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)O1tT(AGU)O1 73 nt0.73□□□□□ -2.29
CCT8P47079 tT(AGU)O2tT(AGU)O2 73 nt0.73□□□□□ -2.29
CCT8P47079 IQG1YPL242C 4488 nt0.71□□□□□ -2.3
CCT8P47079 YKL145W-AYKL145W-A 93 nt0.7□□□□□ -2.3
CCT8P47079 YOR335W-AYOR335W-A 81 nt0.7□□□□□ -2.3
CCT8P47079 MLP1YKR095W 5628 nt0.7□□□□□ -2.3
CCT8P47079 RPL41BYDL133C-A 78 nt0.68□□□□□ -2.3
CCT8P47079 YOL014WYOL014W 375 nt0.67□□□□□ -2.3
CCT8P47079 YMR272W-AYMR272W-A 114 nt0.66□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 44.9 ms