Protein–RNA interactions for Protein: P43609

RSC8, Chromatin structure-remodeling complex protein RSC8, yeastyeast

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSC8P43609 RCO1YMR075W 2055 nt0.97□□□□□ -2.25
RSC8P43609 YNL266WYNL266W 420 nt0.97□□□□□ -2.25
RSC8P43609 NNF2YGR089W 2811 nt0.96□□□□□ -2.26
RSC8P43609 YLL006W-AYLL006W-A 177 nt0.96□□□□□ -2.26
RSC8P43609 YMR326CYMR326C 309 nt0.96□□□□□ -2.26
RSC8P43609 YBR178WYBR178W 375 nt0.93□□□□□ -2.26
RSC8P43609 YGL041C-BYGL041C-B 183 nt0.91□□□□□ -2.26
RSC8P43609 LTE1YAL024C 4308 nt0.9□□□□□ -2.27
RSC8P43609 CSE1YGL238W 2883 nt0.89□□□□□ -2.27
RSC8P43609 YHR217CYHR217C 462 nt0.87□□□□□ -2.27
RSC8P43609 SEC10YLR166C 2616 nt0.85□□□□□ -2.27
RSC8P43609 YOR192C-BYOR192C-B 5313 nt0.85□□□□□ -2.27
RSC8P43609 SBH1YER087C-B 249 nt0.85□□□□□ -2.27
RSC8P43609 NIP1YMR309C 2439 nt0.85□□□□□ -2.27
RSC8P43609 YBR196C-AYBR196C-A 150 nt0.84□□□□□ -2.27
RSC8P43609 BUL2YML111W 2763 nt0.84□□□□□ -2.28
RSC8P43609 YPR159C-AYPR159C-A 102 nt0.81□□□□□ -2.28
RSC8P43609 PET111YMR257C 2403 nt0.81□□□□□ -2.28
RSC8P43609 snR81snR81 201 nt0.79□□□□□ -2.28
RSC8P43609 RPS26AYGL189C 360 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
RSC8P43609 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
RSC8P43609 YAL037C-AYAL037C-A 93 nt0.79□□□□□ -2.28
RSC8P43609 EST1YLR233C 2100 nt0.79□□□□□ -2.28
RSC8P43609 AI1Q0050 2505 nt0.78□□□□□ -2.28
RSC8P43609 snR69snR69 101 nt0.78□□□□□ -2.28
RSC8P43609 YPL060C-AYPL060C-A 3315 nt0.78□□□□□ -2.28
RSC8P43609 THO2YNL139C 4794 nt0.77□□□□□ -2.29
RSC8P43609 tD(GUC)QtD(GUC)Q 75 nt0.77□□□□□ -2.29
RSC8P43609 YDR371C-AYDR371C-A 105 nt0.77□□□□□ -2.29
RSC8P43609 YMR272W-AYMR272W-A 114 nt0.75□□□□□ -2.29
RSC8P43609 YJL077W-AYJL077W-A 87 nt0.73□□□□□ -2.29
RSC8P43609 YOL083C-AYOL083C-A 141 nt0.73□□□□□ -2.29
RSC8P43609 YLR286W-AYLR286W-A 135 nt0.72□□□□□ -2.29
RSC8P43609 RDS3YPR094W 324 nt0.72□□□□□ -2.29
RSC8P43609 MLP1YKR095W 5628 nt0.72□□□□□ -2.29
RSC8P43609 IQG1YPL242C 4488 nt0.71□□□□□ -2.3
RSC8P43609 ORC3YLL004W 1851 nt0.69□□□□□ -2.3
RSC8P43609 YDL247W-AYDL247W-A 75 nt0.69□□□□□ -2.3
RSC8P43609 FMP27YLR454W 7887 nt0.69□□□□□ -2.3
RSC8P43609 YBL071C-BYBL071C-B 99 nt0.67□□□□□ -2.3
RSC8P43609 tS(GCU)Q1tS(GCU)Q1 86 nt0.66□□□□□ -2.3
RSC8P43609 YDL159C-BYDL159C-B 177 nt0.65□□□□□ -2.31
RSC8P43609 UTP10YJL109C 5310 nt0.64□□□□□ -2.31
RSC8P43609 tQ(UUG)QtQ(UUG)Q 76 nt0.64□□□□□ -2.31
RSC8P43609 YLR299C-AYLR299C-A 93 nt0.63□□□□□ -2.31
RSC8P43609 YBL100W-BYBL100W-B 5313 nt0.61□□□□□ -2.31
RSC8P43609 YER078W-AYER078W-A 165 nt0.6□□□□□ -2.31
RSC8P43609 MYO1YHR023W 5787 nt0.6□□□□□ -2.31
RSC8P43609 YBL100W-CYBL100W-C 120 nt0.58□□□□□ -2.32
RSC8P43609 YOL164W-AYOL164W-A 183 nt0.58□□□□□ -2.32
RSC8P43609 snR62snR62 100 nt0.53□□□□□ -2.32
RSC8P43609 YOR186C-AYOR186C-A 210 nt0.53□□□□□ -2.32
RSC8P43609 YNL054W-BYNL054W-B 5250 nt0.51□□□□□ -2.33
RSC8P43609 YGR240C-AYGR240C-A 201 nt0.51□□□□□ -2.33
RSC8P43609 YER090C-AYER090C-A 90 nt0.5□□□□□ -2.33
RSC8P43609 snR50snR50 90 nt0.48□□□□□ -2.33
RSC8P43609 YLL066W-BYLL066W-B 171 nt0.47□□□□□ -2.33
RSC8P43609 MLP2YIL149C 5040 nt0.46□□□□□ -2.34
RSC8P43609 YML054C-AYML054C-A 159 nt0.45□□□□□ -2.34
RSC8P43609 snR45snR45 172 nt0.45□□□□□ -2.34
RSC8P43609 snR47snR47 99 nt0.45□□□□□ -2.34
RSC8P43609 YHR180C-BYHR180C-B 105 nt0.43□□□□□ -2.34
RSC8P43609 YDR034C-AYDR034C-A 177 nt0.42□□□□□ -2.34
RSC8P43609 snR67snR67 82 nt0.33□□□□□ -2.36
RSC8P43609 SOV1YMR066W 2697 nt0.32□□□□□ -2.36
RSC8P43609 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
RSC8P43609 YBR109W-AYBR109W-A 225 nt0.31□□□□□ -2.36
RSC8P43609 RPL41AYDL184C 78 nt0.3□□□□□ -2.36
RSC8P43609 YBR296C-AYBR296C-A 120 nt0.28□□□□□ -2.36
RSC8P43609 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
RSC8P43609 YML100W-AYML100W-A 174 nt0.24□□□□□ -2.37
RSC8P43609 snR128snR128 126 nt0.22□□□□□ -2.37
RSC8P43609 YKL225WYKL225W 348 nt0.2□□□□□ -2.38
RSC8P43609 snR38snR38 95 nt0.19□□□□□ -2.38
RSC8P43609 snR64snR64 101 nt0.12□□□□□ -2.39
RSC8P43609 SKI7YOR076C 2244 nt0.1□□□□□ -2.39
RSC8P43609 PAU9YBL108C-A 129 nt0.02□□□□□ -2.41
RSC8P43609 snR53snR53 91 nt-0.02□□□□□ -2.41
RSC8P43609 YKL106C-AYKL106C-A 120 nt-0.06□□□□□ -2.42
RSC8P43609 tA(UGC)QtA(UGC)Q 76 nt-0.11□□□□□ -2.43
RSC8P43609 YJL113WYJL113W 4647 nt-0.13□□□□□ -2.43
RSC8P43609 YDL159W-AYDL159W-A 132 nt-0.13□□□□□ -2.43
RSC8P43609 SBH2YER019C-A 267 nt-0.14□□□□□ -2.43
RSC8P43609 YGR122C-AYGR122C-A 129 nt-0.17□□□□□ -2.44
RSC8P43609 YOR376W-AYOR376W-A 156 nt-0.18□□□□□ -2.44
RSC8P43609 YOR316C-AYOR316C-A 210 nt-0.29□□□□□ -2.46
RSC8P43609 snR161snR161 161 nt-0.33□□□□□ -2.46
RSC8P43609 YDL114W-AYDL114W-A 114 nt-0.36□□□□□ -2.47
RSC8P43609 YLR149C-AYLR149C-A 87 nt-0.39□□□□□ -2.47
RSC8P43609 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
Retrieved 100 of 7,029 protein–RNA pairs in 56.7 ms