Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.16■□□□□ 0.82
HADHAP40939 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.16■□□□□ 0.82
HADHAP40939 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HADHAP40939 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
HADHAP40939 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.16■□□□□ 0.82
HADHAP40939 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HADHAP40939 RNF165-205ENST00000588679 2904 ntBASIC20.15■□□□□ 0.82
HADHAP40939 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 MIPEPP3-201ENST00000412105 444 ntBASIC20.15■□□□□ 0.82
HADHAP40939 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.15■□□□□ 0.82
HADHAP40939 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.15■□□□□ 0.82
HADHAP40939 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
HADHAP40939 TSPY6P-201ENST00000448518 926 ntBASIC20.15■□□□□ 0.82
HADHAP40939 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.15■□□□□ 0.82
HADHAP40939 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.15■□□□□ 0.82
HADHAP40939 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.15■□□□□ 0.82
HADHAP40939 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.15■□□□□ 0.82
HADHAP40939 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HADHAP40939 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.15■□□□□ 0.82
HADHAP40939 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HADHAP40939 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HADHAP40939 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
HADHAP40939 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HADHAP40939 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.14■□□□□ 0.81
HADHAP40939 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.14■□□□□ 0.81
HADHAP40939 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
HADHAP40939 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.14■□□□□ 0.81
HADHAP40939 C2orf69P4-201ENST00000565394 541 ntBASIC20.14■□□□□ 0.81
HADHAP40939 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.14■□□□□ 0.81
HADHAP40939 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
HADHAP40939 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.14■□□□□ 0.81
HADHAP40939 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HADHAP40939 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.14■□□□□ 0.81
HADHAP40939 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HADHAP40939 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
HADHAP40939 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
HADHAP40939 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
HADHAP40939 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.13■□□□□ 0.81
HADHAP40939 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.13■□□□□ 0.81
HADHAP40939 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.13■□□□□ 0.81
HADHAP40939 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.13■□□□□ 0.81
HADHAP40939 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
HADHAP40939 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.13■□□□□ 0.81
HADHAP40939 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.13■□□□□ 0.81
HADHAP40939 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.13■□□□□ 0.81
HADHAP40939 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HADHAP40939 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.13■□□□□ 0.81
HADHAP40939 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
HADHAP40939 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.12■□□□□ 0.81
HADHAP40939 AC138932.1-201ENST00000534164 6830 ntBASIC20.12■□□□□ 0.81
HADHAP40939 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.12■□□□□ 0.81
HADHAP40939 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.12■□□□□ 0.81
HADHAP40939 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
HADHAP40939 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.12■□□□□ 0.81
HADHAP40939 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HADHAP40939 GUSBP6-202ENST00000438529 1198 ntBASIC20.12■□□□□ 0.81
HADHAP40939 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.12■□□□□ 0.81
HADHAP40939 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.12■□□□□ 0.81
HADHAP40939 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 AC092118.2-201ENST00000613495 667 ntBASIC20.12■□□□□ 0.81
HADHAP40939 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.12■□□□□ 0.81
HADHAP40939 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.12■□□□□ 0.81
HADHAP40939 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HADHAP40939 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.12■□□□□ 0.81
HADHAP40939 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.11■□□□□ 0.81
HADHAP40939 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HADHAP40939 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms