Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 ROM2YLR371W 4071 nt1.24□□□□□ -2.21
SDS3P40505 SIP4YJL089W 2490 nt1.24□□□□□ -2.21
SDS3P40505 RPM2YML091C 3609 nt1.23□□□□□ -2.21
SDS3P40505 YLR286W-AYLR286W-A 135 nt1.23□□□□□ -2.21
SDS3P40505 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
SDS3P40505 snR47snR47 99 nt1.21□□□□□ -2.22
SDS3P40505 YSP1YHR155W 3687 nt1.2□□□□□ -2.22
SDS3P40505 GLG1YKR058W 1851 nt1.2□□□□□ -2.22
SDS3P40505 VAM6YDL077C 3150 nt1.2□□□□□ -2.22
SDS3P40505 tD(GUC)QtD(GUC)Q 75 nt1.18□□□□□ -2.22
SDS3P40505 ULP2YIL031W 3105 nt1.16□□□□□ -2.22
SDS3P40505 ORC3YLL004W 1851 nt1.16□□□□□ -2.22
SDS3P40505 YJR029WYJR029W 5268 nt1.16□□□□□ -2.22
SDS3P40505 YPR137C-BYPR137C-B 5268 nt1.16□□□□□ -2.22
SDS3P40505 EST1YLR233C 2100 nt1.15□□□□□ -2.23
SDS3P40505 DOP1YDR141C 5097 nt1.15□□□□□ -2.23
SDS3P40505 SCC2YDR180W 4482 nt1.15□□□□□ -2.23
SDS3P40505 YOL014WYOL014W 375 nt1.13□□□□□ -2.23
SDS3P40505 CSE1YGL238W 2883 nt1.11□□□□□ -2.23
SDS3P40505 MYO1YHR023W 5787 nt1.11□□□□□ -2.23
SDS3P40505 snR69snR69 101 nt1.11□□□□□ -2.23
SDS3P40505 YLR299C-AYLR299C-A 93 nt1.11□□□□□ -2.23
SDS3P40505 BEM2YER155C 6504 nt1.11□□□□□ -2.23
SDS3P40505 YDL159C-BYDL159C-B 177 nt1.09□□□□□ -2.23
SDS3P40505 BUD3YCL014W 4911 nt1.08□□□□□ -2.24
SDS3P40505 EMT1tM(CAU)D 73 nt1.08□□□□□ -2.24
SDS3P40505 EMT5tM(CAU)J1 73 nt1.08□□□□□ -2.24
SDS3P40505 EMT3tM(CAU)J2 73 nt1.08□□□□□ -2.24
SDS3P40505 EMT4tM(CAU)M 73 nt1.08□□□□□ -2.24
SDS3P40505 EMT2tM(CAU)O2 73 nt1.08□□□□□ -2.24
SDS3P40505 YLL006W-AYLL006W-A 177 nt1.08□□□□□ -2.24
SDS3P40505 RDS3YPR094W 324 nt1.05□□□□□ -2.24
SDS3P40505 snR53snR53 91 nt1.05□□□□□ -2.24
SDS3P40505 NIP1YMR309C 2439 nt1.04□□□□□ -2.24
SDS3P40505 snR64snR64 101 nt1.04□□□□□ -2.24
SDS3P40505 RKR1YMR247C 4689 nt1.01□□□□□ -2.25
SDS3P40505 UTP20YBL004W 7482 nt1□□□□□ -2.25
SDS3P40505 BUL2YML111W 2763 nt0.99□□□□□ -2.25
SDS3P40505 YKL225WYKL225W 348 nt0.99□□□□□ -2.25
SDS3P40505 YHR180C-BYHR180C-B 105 nt0.98□□□□□ -2.25
SDS3P40505 YML054C-AYML054C-A 159 nt0.98□□□□□ -2.25
SDS3P40505 YKL145W-AYKL145W-A 93 nt0.97□□□□□ -2.25
SDS3P40505 YOR192C-BYOR192C-B 5313 nt0.96□□□□□ -2.26
SDS3P40505 tQ(UUG)QtQ(UUG)Q 76 nt0.96□□□□□ -2.26
SDS3P40505 YJL077W-AYJL077W-A 87 nt0.96□□□□□ -2.26
SDS3P40505 YBR109W-AYBR109W-A 225 nt0.96□□□□□ -2.26
SDS3P40505 YPL060C-AYPL060C-A 3315 nt0.96□□□□□ -2.26
SDS3P40505 snR50snR50 90 nt0.95□□□□□ -2.26
SDS3P40505 RPL41AYDL184C 78 nt0.93□□□□□ -2.26
SDS3P40505 snR38snR38 95 nt0.89□□□□□ -2.27
SDS3P40505 YMR160WYMR160W 2451 nt0.89□□□□□ -2.27
SDS3P40505 YBR296C-AYBR296C-A 120 nt0.88□□□□□ -2.27
SDS3P40505 YNL054W-BYNL054W-B 5250 nt0.87□□□□□ -2.27
SDS3P40505 YDR371C-AYDR371C-A 105 nt0.84□□□□□ -2.27
SDS3P40505 YER090C-AYER090C-A 90 nt0.83□□□□□ -2.28
SDS3P40505 AI1Q0050 2505 nt0.82□□□□□ -2.28
SDS3P40505 YDL159W-AYDL159W-A 132 nt0.82□□□□□ -2.28
SDS3P40505 PET111YMR257C 2403 nt0.81□□□□□ -2.28
SDS3P40505 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
SDS3P40505 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
SDS3P40505 SKI7YOR076C 2244 nt0.77□□□□□ -2.29
SDS3P40505 LTE1YAL024C 4308 nt0.73□□□□□ -2.29
SDS3P40505 YLR149C-AYLR149C-A 87 nt0.72□□□□□ -2.29
SDS3P40505 YPR159C-AYPR159C-A 102 nt0.71□□□□□ -2.3
SDS3P40505 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
SDS3P40505 snR67snR67 82 nt0.69□□□□□ -2.3
SDS3P40505 YGR122C-AYGR122C-A 129 nt0.69□□□□□ -2.3
SDS3P40505 YBL100W-BYBL100W-B 5313 nt0.66□□□□□ -2.3
SDS3P40505 UTP10YJL109C 5310 nt0.62□□□□□ -2.31
SDS3P40505 YKL096C-BYKL096C-B 150 nt0.6□□□□□ -2.31
SDS3P40505 FMP27YLR454W 7887 nt0.57□□□□□ -2.32
SDS3P40505 MLP1YKR095W 5628 nt0.57□□□□□ -2.32
SDS3P40505 MLP2YIL149C 5040 nt0.57□□□□□ -2.32
SDS3P40505 YER078W-AYER078W-A 165 nt0.56□□□□□ -2.32
SDS3P40505 YOR186C-AYOR186C-A 210 nt0.52□□□□□ -2.33
SDS3P40505 THO2YNL139C 4794 nt0.5□□□□□ -2.33
SDS3P40505 IQG1YPL242C 4488 nt0.49□□□□□ -2.33
SDS3P40505 YKL106C-AYKL106C-A 120 nt0.48□□□□□ -2.33
SDS3P40505 snR75snR75 89 nt0.46□□□□□ -2.34
SDS3P40505 YML100W-AYML100W-A 174 nt0.45□□□□□ -2.34
SDS3P40505 YDL114W-AYDL114W-A 114 nt0.39□□□□□ -2.35
SDS3P40505 SOV1YMR066W 2697 nt0.38□□□□□ -2.35
SDS3P40505 YOR376W-AYOR376W-A 156 nt0.33□□□□□ -2.36
SDS3P40505 tV(UAC)QtV(UAC)Q 76 nt0.32□□□□□ -2.36
SDS3P40505 snR128snR128 126 nt0.32□□□□□ -2.36
SDS3P40505 PAU9YBL108C-A 129 nt0.28□□□□□ -2.36
SDS3P40505 ESP1YGR098C 4893 nt0.27□□□□□ -2.37
SDS3P40505 YOL013W-AYOL013W-A 192 nt0.26□□□□□ -2.37
SDS3P40505 YOR316C-AYOR316C-A 210 nt0.23□□□□□ -2.37
SDS3P40505 snR77snR77 88 nt0.19□□□□□ -2.38
SDS3P40505 SBH2YER019C-A 267 nt0.16□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 69.7 ms