Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YJL077W-AYJL077W-A 87 nt-0.23□□□□□ -2.45
NDE1P40215 snR52snR52 92 nt-0.25□□□□□ -2.45
NDE1P40215 YLR342W-AYLR342W-A 174 nt-0.26□□□□□ -2.45
NDE1P40215 snR39BsnR39B 96 nt-0.26□□□□□ -2.45
NDE1P40215 SBH2YER019C-A 267 nt-0.27□□□□□ -2.45
NDE1P40215 YGR164WYGR164W 336 nt-0.27□□□□□ -2.45
NDE1P40215 snR46snR46 197 nt-0.27□□□□□ -2.45
NDE1P40215 TFB5YDR079C-A 219 nt-0.29□□□□□ -2.46
NDE1P40215 YOR329W-AYOR329W-A 210 nt-0.3□□□□□ -2.46
NDE1P40215 YGR146C-AYGR146C-A 162 nt-0.31□□□□□ -2.46
NDE1P40215 tQ(UUG)QtQ(UUG)Q 76 nt-0.33□□□□□ -2.46
NDE1P40215 snR69snR69 101 nt-0.34□□□□□ -2.46
NDE1P40215 YDR406W-AYDR406W-A 246 nt-0.35□□□□□ -2.47
NDE1P40215 snR48snR48 113 nt-0.39□□□□□ -2.47
NDE1P40215 YHL015W-AYHL015W-A 84 nt-0.4□□□□□ -2.47
NDE1P40215 PMP2YEL017C-A 132 nt-0.41□□□□□ -2.48
NDE1P40215 YIL071W-AYIL071W-A 477 nt-0.41□□□□□ -2.48
NDE1P40215 YML100W-AYML100W-A 174 nt-0.43□□□□□ -2.48
NDE1P40215 RDS3YPR094W 324 nt-0.43□□□□□ -2.48
NDE1P40215 SEC10YLR166C 2616 nt-0.46□□□□□ -2.48
NDE1P40215 YDL007C-AYDL007C-A 258 nt-0.46□□□□□ -2.48
NDE1P40215 YJL113WYJL113W 4647 nt-0.46□□□□□ -2.48
NDE1P40215 tL(UAA)QtL(UAA)Q 85 nt-0.47□□□□□ -2.48
NDE1P40215 YOR102WYOR102W 351 nt-0.47□□□□□ -2.48
NDE1P40215 YNL067W-BYNL067W-B 141 nt-0.48□□□□□ -2.49
NDE1P40215 YNL205CYNL205C 423 nt-0.49□□□□□ -2.49
NDE1P40215 PAU9YBL108C-A 129 nt-0.49□□□□□ -2.49
NDE1P40215 tA(UGC)QtA(UGC)Q 76 nt-0.5□□□□□ -2.49
NDE1P40215 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
NDE1P40215 YER090C-AYER090C-A 90 nt-0.51□□□□□ -2.49
NDE1P40215 YMR046W-AYMR046W-A 129 nt-0.53□□□□□ -2.49
NDE1P40215 tD(GUC)QtD(GUC)Q 75 nt-0.55□□□□□ -2.5
NDE1P40215 snR50snR50 90 nt-0.55□□□□□ -2.5
NDE1P40215 YNL266WYNL266W 420 nt-0.57□□□□□ -2.5
NDE1P40215 YBR178WYBR178W 375 nt-0.58□□□□□ -2.5
NDE1P40215 YJL150WYJL150W 303 nt-0.59□□□□□ -2.5
NDE1P40215 YHL009W-BYHL009W-B 5409 nt-0.6□□□□□ -2.5
NDE1P40215 SPG3YDR504C 384 nt-0.6□□□□□ -2.51
NDE1P40215 YLR286W-AYLR286W-A 135 nt-0.61□□□□□ -2.51
NDE1P40215 JLP2YMR132C 627 nt-0.61□□□□□ -2.51
NDE1P40215 YNL198CYNL198C 303 nt-0.62□□□□□ -2.51
NDE1P40215 YDL159C-BYDL159C-B 177 nt-0.65□□□□□ -2.51
NDE1P40215 tM(CAU)Q1tM(CAU)Q1 76 nt-0.66□□□□□ -2.52
NDE1P40215 snR67snR67 82 nt-0.68□□□□□ -2.52
NDE1P40215 YBR196C-AYBR196C-A 150 nt-0.72□□□□□ -2.52
NDE1P40215 tT(UGU)G1tT(UGU)G1 72 nt-0.73□□□□□ -2.53
NDE1P40215 tT(UGU)G2tT(UGU)G2 72 nt-0.73□□□□□ -2.53
NDE1P40215 tT(UGU)PtT(UGU)P 72 nt-0.73□□□□□ -2.53
NDE1P40215 snR33snR33 183 nt-0.73□□□□□ -2.53
NDE1P40215 YBL053WYBL053W 375 nt-0.74□□□□□ -2.53
NDE1P40215 SOM1YEL059C-A 225 nt-0.78□□□□□ -2.53
NDE1P40215 YLR299C-AYLR299C-A 93 nt-0.78□□□□□ -2.53
NDE1P40215 SKI7YOR076C 2244 nt-0.82□□□□□ -2.54
NDE1P40215 snR161snR161 161 nt-0.83□□□□□ -2.54
NDE1P40215 YCR095W-AYCR095W-A 159 nt-0.86□□□□□ -2.55
NDE1P40215 YGR151CYGR151C 336 nt-0.88□□□□□ -2.55
NDE1P40215 YLR466C-BYLR466C-B 117 nt-0.88□□□□□ -2.55
NDE1P40215 YML054C-AYML054C-A 159 nt-0.98□□□□□ -2.57
NDE1P40215 YNL338WYNL338W 159 nt-1□□□□□ -2.57
NDE1P40215 YHR180C-BYHR180C-B 105 nt-1.01□□□□□ -2.57
NDE1P40215 tP(UGG)QtP(UGG)Q 72 nt-1.04□□□□□ -2.58
NDE1P40215 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
NDE1P40215 YNL337WYNL337W 255 nt-1.08□□□□□ -2.58
NDE1P40215 YCL001W-BYCL001W-B 255 nt-1.1□□□□□ -2.59
NDE1P40215 YGR240C-AYGR240C-A 201 nt-1.17□□□□□ -2.6
NDE1P40215 YOR376W-AYOR376W-A 156 nt-1.17□□□□□ -2.6
NDE1P40215 Q0032Q0032 291 nt-1.19□□□□□ -2.6
NDE1P40215 CDC65tQ(CUG)M 72 nt-1.19□□□□□ -2.6
NDE1P40215 YOL083C-AYOL083C-A 141 nt-1.2□□□□□ -2.6
NDE1P40215 snR77snR77 88 nt-1.21□□□□□ -2.6
NDE1P40215 YNR077CYNR077C 255 nt-1.23□□□□□ -2.61
NDE1P40215 YKL106C-AYKL106C-A 120 nt-1.26□□□□□ -2.61
NDE1P40215 YBR296C-AYBR296C-A 120 nt-1.28□□□□□ -2.61
NDE1P40215 RPL41AYDL184C 78 nt-1.29□□□□□ -2.62
NDE1P40215 YBL071C-BYBL071C-B 99 nt-1.29□□□□□ -2.62
NDE1P40215 YBR109W-AYBR109W-A 225 nt-1.29□□□□□ -2.62
NDE1P40215 YOR316C-AYOR316C-A 210 nt-1.3□□□□□ -2.62
NDE1P40215 YGL007C-AYGL007C-A 87 nt-1.32□□□□□ -2.62
NDE1P40215 YAL037C-AYAL037C-A 93 nt-1.32□□□□□ -2.62
NDE1P40215 YMR315W-AYMR315W-A 108 nt-1.34□□□□□ -2.62
NDE1P40215 YOL164W-AYOL164W-A 183 nt-1.35□□□□□ -2.63
NDE1P40215 YBL100W-CYBL100W-C 120 nt-1.37□□□□□ -2.63
NDE1P40215 snR81snR81 201 nt-1.38□□□□□ -2.63
NDE1P40215 snR38snR38 95 nt-1.38□□□□□ -2.63
NDE1P40215 tY(GUA)QtY(GUA)Q 84 nt-1.39□□□□□ -2.63
NDE1P40215 snR47snR47 99 nt-1.44□□□□□ -2.64
NDE1P40215 YLR294CYLR294C 330 nt-1.57□□□□□ -2.66
NDE1P40215 YGL041C-BYGL041C-B 183 nt-1.62□□□□□ -2.67
NDE1P40215 tS(GCU)Q1tS(GCU)Q1 86 nt-1.64□□□□□ -2.67
NDE1P40215 YOR225WYOR225W 330 nt-1.64□□□□□ -2.67
NDE1P40215 YOR309CYOR309C 381 nt-1.64□□□□□ -2.67
NDE1P40215 YKL225WYKL225W 348 nt-1.66□□□□□ -2.68
NDE1P40215 snR61snR61 90 nt-1.67□□□□□ -2.68
NDE1P40215 YNL103W-AYNL103W-A 90 nt-1.68□□□□□ -2.68
NDE1P40215 YNL170WYNL170W 396 nt-1.73□□□□□ -2.69
NDE1P40215 snR6snR6 112 nt-1.77□□□□□ -2.69
NDE1P40215 YDR034C-AYDR034C-A 177 nt-1.8□□□□□ -2.7
NDE1P40215 YDL114W-AYDL114W-A 114 nt-1.81□□□□□ -2.7
NDE1P40215 tV(UAC)QtV(UAC)Q 76 nt-1.84□□□□□ -2.7
NDE1P40215 snR62snR62 100 nt-1.86□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 40.8 ms