Protein–RNA interactions for Protein: P38810

SFB3, SED5-binding protein 3, yeastyeast

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SFB3P38810 SEC10YLR166C 2616 nt1.02□□□□□ -2.25
SFB3P38810 YBR196C-AYBR196C-A 150 nt1.02□□□□□ -2.25
SFB3P38810 SCC2YDR180W 4482 nt1.01□□□□□ -2.25
SFB3P38810 VAM6YDL077C 3150 nt1.01□□□□□ -2.25
SFB3P38810 YLL006W-AYLL006W-A 177 nt1□□□□□ -2.25
SFB3P38810 YPL060C-AYPL060C-A 3315 nt0.99□□□□□ -2.25
SFB3P38810 BEM2YER155C 6504 nt0.99□□□□□ -2.25
SFB3P38810 YJR029WYJR029W 5268 nt0.98□□□□□ -2.25
SFB3P38810 YPR137C-BYPR137C-B 5268 nt0.98□□□□□ -2.25
SFB3P38810 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
SFB3P38810 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
SFB3P38810 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
SFB3P38810 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
SFB3P38810 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
SFB3P38810 YKL145W-AYKL145W-A 93 nt0.96□□□□□ -2.26
SFB3P38810 RKR1YMR247C 4689 nt0.95□□□□□ -2.26
SFB3P38810 YOL083C-AYOL083C-A 141 nt0.95□□□□□ -2.26
SFB3P38810 CSE1YGL238W 2883 nt0.93□□□□□ -2.26
SFB3P38810 YBL071C-BYBL071C-B 99 nt0.92□□□□□ -2.26
SFB3P38810 BUL2YML111W 2763 nt0.91□□□□□ -2.26
SFB3P38810 EST1YLR233C 2100 nt0.91□□□□□ -2.26
SFB3P38810 tD(GUC)QtD(GUC)Q 75 nt0.91□□□□□ -2.26
SFB3P38810 RPS26AYGL189C 360 nt0.91□□□□□ -2.26
SFB3P38810 LTE1YAL024C 4308 nt0.9□□□□□ -2.27
SFB3P38810 snR69snR69 101 nt0.9□□□□□ -2.27
SFB3P38810 NIP1YMR309C 2439 nt0.89□□□□□ -2.27
SFB3P38810 YLR286W-AYLR286W-A 135 nt0.89□□□□□ -2.27
SFB3P38810 snR62snR62 100 nt0.88□□□□□ -2.27
SFB3P38810 YLL066W-BYLL066W-B 171 nt0.88□□□□□ -2.27
SFB3P38810 YJL077W-AYJL077W-A 87 nt0.86□□□□□ -2.27
SFB3P38810 THO2YNL139C 4794 nt0.85□□□□□ -2.27
SFB3P38810 snR45snR45 172 nt0.85□□□□□ -2.27
SFB3P38810 RDS3YPR094W 324 nt0.84□□□□□ -2.27
SFB3P38810 YOR192C-BYOR192C-B 5313 nt0.83□□□□□ -2.28
SFB3P38810 YBL100W-CYBL100W-C 120 nt0.83□□□□□ -2.28
SFB3P38810 YOL164W-AYOL164W-A 183 nt0.83□□□□□ -2.28
SFB3P38810 MYO1YHR023W 5787 nt0.81□□□□□ -2.28
SFB3P38810 PET111YMR257C 2403 nt0.81□□□□□ -2.28
SFB3P38810 YDL159C-BYDL159C-B 177 nt0.8□□□□□ -2.28
SFB3P38810 YLR299C-AYLR299C-A 93 nt0.8□□□□□ -2.28
SFB3P38810 YDR371C-AYDR371C-A 105 nt0.79□□□□□ -2.28
SFB3P38810 AI1Q0050 2505 nt0.78□□□□□ -2.28
SFB3P38810 YGR240C-AYGR240C-A 201 nt0.77□□□□□ -2.29
SFB3P38810 tT(AGU)BtT(AGU)B 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)CtT(AGU)C 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)DtT(AGU)D 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)HtT(AGU)H 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)I1tT(AGU)I1 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)I2tT(AGU)I2 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)JtT(AGU)J 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)N1tT(AGU)N1 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)N2tT(AGU)N2 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)O1tT(AGU)O1 73 nt0.76□□□□□ -2.29
SFB3P38810 tT(AGU)O2tT(AGU)O2 73 nt0.76□□□□□ -2.29
SFB3P38810 IQG1YPL242C 4488 nt0.74□□□□□ -2.29
SFB3P38810 YDR034C-AYDR034C-A 177 nt0.73□□□□□ -2.29
SFB3P38810 MLP1YKR095W 5628 nt0.73□□□□□ -2.29
SFB3P38810 tQ(UUG)QtQ(UUG)Q 76 nt0.72□□□□□ -2.29
SFB3P38810 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
SFB3P38810 ORC3YLL004W 1851 nt0.7□□□□□ -2.3
SFB3P38810 snR47snR47 99 nt0.7□□□□□ -2.3
SFB3P38810 FMP27YLR454W 7887 nt0.68□□□□□ -2.3
SFB3P38810 YBL100W-BYBL100W-B 5313 nt0.67□□□□□ -2.3
SFB3P38810 YER090C-AYER090C-A 90 nt0.64□□□□□ -2.31
SFB3P38810 YML054C-AYML054C-A 159 nt0.63□□□□□ -2.31
SFB3P38810 YNL054W-BYNL054W-B 5250 nt0.63□□□□□ -2.31
SFB3P38810 YHR180C-BYHR180C-B 105 nt0.62□□□□□ -2.31
SFB3P38810 YMR272W-AYMR272W-A 114 nt0.62□□□□□ -2.31
SFB3P38810 YER078W-AYER078W-A 165 nt0.61□□□□□ -2.31
SFB3P38810 snR50snR50 90 nt0.58□□□□□ -2.32
SFB3P38810 YOR186C-AYOR186C-A 210 nt0.55□□□□□ -2.32
SFB3P38810 UTP10YJL109C 5310 nt0.55□□□□□ -2.32
SFB3P38810 YBR109W-AYBR109W-A 225 nt0.54□□□□□ -2.32
SFB3P38810 RPL41AYDL184C 78 nt0.52□□□□□ -2.33
SFB3P38810 YBR296C-AYBR296C-A 120 nt0.51□□□□□ -2.33
SFB3P38810 MLP2YIL149C 5040 nt0.49□□□□□ -2.33
SFB3P38810 YKL225WYKL225W 348 nt0.48□□□□□ -2.33
SFB3P38810 snR67snR67 82 nt0.47□□□□□ -2.33
SFB3P38810 snR64snR64 101 nt0.46□□□□□ -2.34
SFB3P38810 snR38snR38 95 nt0.43□□□□□ -2.34
SFB3P38810 snR53snR53 91 nt0.41□□□□□ -2.34
SFB3P38810 SOV1YMR066W 2697 nt0.38□□□□□ -2.35
SFB3P38810 ESP1YGR098C 4893 nt0.35□□□□□ -2.35
SFB3P38810 YML100W-AYML100W-A 174 nt0.34□□□□□ -2.36
SFB3P38810 YOL013W-AYOL013W-A 192 nt0.31□□□□□ -2.36
SFB3P38810 SKI7YOR076C 2244 nt0.25□□□□□ -2.37
SFB3P38810 snR128snR128 126 nt0.24□□□□□ -2.37
SFB3P38810 YDL159W-AYDL159W-A 132 nt0.17□□□□□ -2.38
SFB3P38810 YKL106C-AYKL106C-A 120 nt0.13□□□□□ -2.39
SFB3P38810 YGR122C-AYGR122C-A 129 nt0.12□□□□□ -2.39
SFB3P38810 PAU9YBL108C-A 129 nt0.07□□□□□ -2.4
SFB3P38810 YLR149C-AYLR149C-A 87 nt0.03□□□□□ -2.4
SFB3P38810 YOR376W-AYOR376W-A 156 nt-0.01□□□□□ -2.41
SFB3P38810 tA(UGC)QtA(UGC)Q 76 nt-0.02□□□□□ -2.41
SFB3P38810 YJL113WYJL113W 4647 nt-0.07□□□□□ -2.42
SFB3P38810 YOR316C-AYOR316C-A 210 nt-0.07□□□□□ -2.42
SFB3P38810 YDL114W-AYDL114W-A 114 nt-0.09□□□□□ -2.42
SFB3P38810 SBH2YER019C-A 267 nt-0.1□□□□□ -2.43
SFB3P38810 YKL096C-BYKL096C-B 150 nt-0.13□□□□□ -2.43
SFB3P38810 tV(UAC)QtV(UAC)Q 76 nt-0.15□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms