Protein–RNA interactions for Protein: P38759

VPS29, Vacuolar protein sorting-associated protein 29, yeastyeast

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS29P38759 YMR272W-BYMR272W-B 108 nt2.05□□□□□ -2.08
VPS29P38759 BST1YFL025C 3090 nt2.05□□□□□ -2.08
VPS29P38759 MON2YNL297C 4911 nt2.05□□□□□ -2.08
VPS29P38759 NUP192YJL039C 5052 nt2.04□□□□□ -2.08
VPS29P38759 DNF3YMR162C 4971 nt2.03□□□□□ -2.08
VPS29P38759 YMR045CYMR045C 5268 nt2.03□□□□□ -2.08
VPS29P38759 FKS1YLR342W 5631 nt2.02□□□□□ -2.09
VPS29P38759 PMD1YER132C 5262 nt2.02□□□□□ -2.09
VPS29P38759 YOR093CYOR093C 4947 nt1.99□□□□□ -2.09
VPS29P38759 snR67snR67 82 nt1.99□□□□□ -2.09
VPS29P38759 BRR2YER172C 6492 nt1.95□□□□□ -2.1
VPS29P38759 TRM732YMR259C 4263 nt1.95□□□□□ -2.1
VPS29P38759 CFT1YDR301W 4074 nt1.93□□□□□ -2.1
VPS29P38759 LAA1YJL207C 6045 nt1.93□□□□□ -2.1
VPS29P38759 YNL284C-BYNL284C-B 5268 nt1.91□□□□□ -2.1
VPS29P38759 tT(UGU)HtT(UGU)H 72 nt1.91□□□□□ -2.1
VPS29P38759 YKL106C-AYKL106C-A 120 nt1.91□□□□□ -2.1
VPS29P38759 YGR130CYGR130C 2451 nt1.91□□□□□ -2.1
VPS29P38759 YMR247W-AYMR247W-A 144 nt1.9□□□□□ -2.11
VPS29P38759 CDC39YCR093W 6327 nt1.89□□□□□ -2.11
VPS29P38759 tV(UAC)QtV(UAC)Q 76 nt1.86□□□□□ -2.11
VPS29P38759 snR40snR40 97 nt1.84□□□□□ -2.11
VPS29P38759 SPT7YBR081C 3999 nt1.83□□□□□ -2.12
VPS29P38759 MEC1YBR136W 7107 nt1.8□□□□□ -2.12
VPS29P38759 SSK2YNR031C 4740 nt1.8□□□□□ -2.12
VPS29P38759 YMR160WYMR160W 2451 nt1.8□□□□□ -2.12
VPS29P38759 SPC110YDR356W 2835 nt1.76□□□□□ -2.13
VPS29P38759 CCH1YGR217W 6120 nt1.74□□□□□ -2.13
VPS29P38759 VAM6YDL077C 3150 nt1.72□□□□□ -2.13
VPS29P38759 YNL054W-BYNL054W-B 5250 nt1.69□□□□□ -2.14
VPS29P38759 YOR192C-BYOR192C-B 5313 nt1.62□□□□□ -2.15
VPS29P38759 VPS15YBR097W 4365 nt1.61□□□□□ -2.15
VPS29P38759 YPR117WYPR117W 7470 nt1.59□□□□□ -2.16
VPS29P38759 IML1YJR138W 4755 nt1.56□□□□□ -2.16
VPS29P38759 LTE1YAL024C 4308 nt1.55□□□□□ -2.16
VPS29P38759 PAU24YBR301W 363 nt1.54□□□□□ -2.16
VPS29P38759 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
VPS29P38759 tH(GUG)E1tH(GUG)E1 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)E2tH(GUG)E2 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)G1tH(GUG)G1 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)G2tH(GUG)G2 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)HtH(GUG)H 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)KtH(GUG)K 72 nt1.49□□□□□ -2.17
VPS29P38759 tH(GUG)MtH(GUG)M 72 nt1.49□□□□□ -2.17
VPS29P38759 HKR1YDR420W 5409 nt1.49□□□□□ -2.17
VPS29P38759 RKR1YMR247C 4689 nt1.46□□□□□ -2.17
VPS29P38759 DOP1YDR141C 5097 nt1.46□□□□□ -2.18
VPS29P38759 snR77snR77 88 nt1.44□□□□□ -2.18
VPS29P38759 BUD3YCL014W 4911 nt1.44□□□□□ -2.18
VPS29P38759 SCC2YDR180W 4482 nt1.44□□□□□ -2.18
VPS29P38759 YOR316C-AYOR316C-A 210 nt1.41□□□□□ -2.18
VPS29P38759 UTP20YBL004W 7482 nt1.4□□□□□ -2.19
VPS29P38759 tV(UAC)BtV(UAC)B 74 nt1.37□□□□□ -2.19
VPS29P38759 tV(UAC)DtV(UAC)D 74 nt1.37□□□□□ -2.19
VPS29P38759 tQ(UUG)E2tQ(UUG)E2 72 nt1.36□□□□□ -2.19
VPS29P38759 SBH2YER019C-A 267 nt1.35□□□□□ -2.19
VPS29P38759 YBL100W-BYBL100W-B 5313 nt1.34□□□□□ -2.2
VPS29P38759 MLP1YKR095W 5628 nt1.33□□□□□ -2.2
VPS29P38759 YJR029WYJR029W 5268 nt1.28□□□□□ -2.2
VPS29P38759 BEM2YER155C 6504 nt1.28□□□□□ -2.2
VPS29P38759 tF(GAA)BtF(GAA)B 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)FtF(GAA)F 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)GtF(GAA)G 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)H1tF(GAA)H1 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)H2tF(GAA)H2 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)MtF(GAA)M 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)P1tF(GAA)P1 73 nt1.26□□□□□ -2.21
VPS29P38759 tF(GAA)P2tF(GAA)P2 73 nt1.26□□□□□ -2.21
VPS29P38759 YML100W-AYML100W-A 174 nt1.23□□□□□ -2.21
VPS29P38759 MYO1YHR023W 5787 nt1.22□□□□□ -2.21
VPS29P38759 YOR186C-AYOR186C-A 210 nt1.21□□□□□ -2.22
VPS29P38759 YPR137C-BYPR137C-B 5268 nt1.19□□□□□ -2.22
VPS29P38759 YOL014WYOL014W 375 nt1.08□□□□□ -2.24
VPS29P38759 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
VPS29P38759 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
VPS29P38759 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
VPS29P38759 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
VPS29P38759 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
VPS29P38759 IQG1YPL242C 4488 nt1.04□□□□□ -2.24
VPS29P38759 SOV1YMR066W 2697 nt1.03□□□□□ -2.24
VPS29P38759 PAU9YBL108C-A 129 nt0.95□□□□□ -2.26
VPS29P38759 YKL145W-AYKL145W-A 93 nt0.93□□□□□ -2.26
VPS29P38759 ESP1YGR098C 4893 nt0.93□□□□□ -2.26
VPS29P38759 THO2YNL139C 4794 nt0.92□□□□□ -2.26
VPS29P38759 YPR159C-AYPR159C-A 102 nt0.88□□□□□ -2.27
VPS29P38759 tT(AGU)BtT(AGU)B 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)CtT(AGU)C 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)DtT(AGU)D 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)HtT(AGU)H 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)I1tT(AGU)I1 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)I2tT(AGU)I2 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)JtT(AGU)J 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)N1tT(AGU)N1 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)N2tT(AGU)N2 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)O1tT(AGU)O1 73 nt0.85□□□□□ -2.27
VPS29P38759 tT(AGU)O2tT(AGU)O2 73 nt0.85□□□□□ -2.27
VPS29P38759 FMP27YLR454W 7887 nt0.81□□□□□ -2.28
VPS29P38759 YJL113WYJL113W 4647 nt0.81□□□□□ -2.28
VPS29P38759 snR128snR128 126 nt0.77□□□□□ -2.29
VPS29P38759 YMR272W-AYMR272W-A 114 nt0.76□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms