Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
SLC6A4P31645 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.51■□□□□ 0.87
SLC6A4P31645 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.51■□□□□ 0.87
SLC6A4P31645 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.51■□□□□ 0.87
SLC6A4P31645 AL121906.2-201ENST00000621597 723 ntBASIC20.51■□□□□ 0.87
SLC6A4P31645 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 KRT16P6-202ENST00000425692 1426 ntBASIC20.51■□□□□ 0.87
SLC6A4P31645 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SLC6A4P31645 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SLC6A4P31645 BX119927.1-201ENST00000636596 1552 ntBASIC20.51■□□□□ 0.87
SLC6A4P31645 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A4P31645 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A4P31645 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 AL162377.1-201ENST00000618844 1793 ntBASIC20.5■□□□□ 0.87
SLC6A4P31645 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A4P31645 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC6A4P31645 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.5■□□□□ 0.87
SLC6A4P31645 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC6A4P31645 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SLC6A4P31645 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC6A4P31645 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SLC6A4P31645 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 PRKY-204ENST00000533551 1019 ntBASIC20.49■□□□□ 0.87
SLC6A4P31645 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.49■□□□□ 0.87
SLC6A4P31645 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.49■□□□□ 0.87
SLC6A4P31645 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC6A4P31645 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC6A4P31645 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC6A4P31645 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SLC6A4P31645 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A4P31645 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC6A4P31645 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A4P31645 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC6A4P31645 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC6A4P31645 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SLC6A4P31645 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A4P31645 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A4P31645 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC6A4P31645 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.48■□□□□ 0.87
SLC6A4P31645 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 AC110285.5-201ENST00000611501 352 ntBASIC20.48■□□□□ 0.87
SLC6A4P31645 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.48■□□□□ 0.87
SLC6A4P31645 LINC01006-201ENST00000333319 2292 ntBASIC20.48■□□□□ 0.87
SLC6A4P31645 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 AL391422.3-201ENST00000603791 2761 ntBASIC20.48■□□□□ 0.87
SLC6A4P31645 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC6A4P31645 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A4P31645 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SLC6A4P31645 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A4P31645 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC6A4P31645 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC6A4P31645 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.47■□□□□ 0.87
SLC6A4P31645 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 AP006294.2-201ENST00000641667 209 ntBASIC20.47■□□□□ 0.87
SLC6A4P31645 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC6A4P31645 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC6A4P31645 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC6A4P31645 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC6A4P31645 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A4P31645 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SLC6A4P31645 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.46■□□□□ 0.87
SLC6A4P31645 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC6A4P31645 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms