Protein–RNA interactions for Protein: P28737

MSP1, Protein MSP1, yeastyeast

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSP1P28737 RCO1YMR075W 2055 nt0.22□□□□□ -2.38
MSP1P28737 snR39BsnR39B 96 nt0.2□□□□□ -2.38
MSP1P28737 YOR329W-AYOR329W-A 210 nt0.18□□□□□ -2.38
MSP1P28737 YBR099CYBR099C 384 nt0.17□□□□□ -2.38
MSP1P28737 THO2YNL139C 4794 nt0.15□□□□□ -2.38
MSP1P28737 YJL150WYJL150W 303 nt0.15□□□□□ -2.39
MSP1P28737 YOR102WYOR102W 351 nt0.15□□□□□ -2.39
MSP1P28737 EST1YLR233C 2100 nt0.11□□□□□ -2.39
MSP1P28737 snR48snR48 113 nt0.1□□□□□ -2.39
MSP1P28737 YGR151CYGR151C 336 nt0.09□□□□□ -2.4
MSP1P28737 YNL067W-BYNL067W-B 141 nt0.08□□□□□ -2.4
MSP1P28737 YGR146C-AYGR146C-A 162 nt0.07□□□□□ -2.4
MSP1P28737 snR128snR128 126 nt0.07□□□□□ -2.4
MSP1P28737 tL(UAA)QtL(UAA)Q 85 nt0.06□□□□□ -2.4
MSP1P28737 YJL077W-AYJL077W-A 87 nt0.06□□□□□ -2.4
MSP1P28737 YLR466C-BYLR466C-B 117 nt0.05□□□□□ -2.4
MSP1P28737 snR45snR45 172 nt0.05□□□□□ -2.4
MSP1P28737 YDL007C-AYDL007C-A 258 nt0.04□□□□□ -2.4
MSP1P28737 tQ(UUG)QtQ(UUG)Q 76 nt0.04□□□□□ -2.4
MSP1P28737 YNL198CYNL198C 303 nt0.04□□□□□ -2.4
MSP1P28737 YNL337WYNL337W 255 nt0.04□□□□□ -2.4
MSP1P28737 snR69snR69 101 nt0□□□□□ -2.41
MSP1P28737 YNL205CYNL205C 423 nt-0.01□□□□□ -2.41
MSP1P28737 PMP2YEL017C-A 132 nt-0.02□□□□□ -2.41
MSP1P28737 YNL338WYNL338W 159 nt-0.02□□□□□ -2.41
MSP1P28737 SOV1YMR066W 2697 nt-0.03□□□□□ -2.41
MSP1P28737 YBL053WYBL053W 375 nt-0.03□□□□□ -2.41
MSP1P28737 RPM2YML091C 3609 nt-0.04□□□□□ -2.42
MSP1P28737 YGR164WYGR164W 336 nt-0.05□□□□□ -2.42
MSP1P28737 RDS3YPR094W 324 nt-0.06□□□□□ -2.42
MSP1P28737 SOM1YEL059C-A 225 nt-0.1□□□□□ -2.43
MSP1P28737 YBR178WYBR178W 375 nt-0.1□□□□□ -2.43
MSP1P28737 SEC10YLR166C 2616 nt-0.11□□□□□ -2.43
MSP1P28737 tD(GUC)QtD(GUC)Q 75 nt-0.12□□□□□ -2.43
MSP1P28737 Q0032Q0032 291 nt-0.14□□□□□ -2.43
MSP1P28737 SBH2YER019C-A 267 nt-0.16□□□□□ -2.44
MSP1P28737 YNL266WYNL266W 420 nt-0.16□□□□□ -2.44
MSP1P28737 YBR196C-AYBR196C-A 150 nt-0.16□□□□□ -2.44
MSP1P28737 YCR095W-AYCR095W-A 159 nt-0.18□□□□□ -2.44
MSP1P28737 TFB5YDR079C-A 219 nt-0.18□□□□□ -2.44
MSP1P28737 PAU9YBL108C-A 129 nt-0.18□□□□□ -2.44
MSP1P28737 snR50snR50 90 nt-0.18□□□□□ -2.44
MSP1P28737 YDL159C-BYDL159C-B 177 nt-0.19□□□□□ -2.44
MSP1P28737 YIL071W-AYIL071W-A 477 nt-0.19□□□□□ -2.44
MSP1P28737 YLR286W-AYLR286W-A 135 nt-0.19□□□□□ -2.44
MSP1P28737 YER090C-AYER090C-A 90 nt-0.2□□□□□ -2.44
MSP1P28737 YGL007C-AYGL007C-A 87 nt-0.23□□□□□ -2.45
MSP1P28737 YML100W-AYML100W-A 174 nt-0.24□□□□□ -2.45
MSP1P28737 YPL060C-AYPL060C-A 3315 nt-0.25□□□□□ -2.45
MSP1P28737 YLR299C-AYLR299C-A 93 nt-0.26□□□□□ -2.45
MSP1P28737 YCL001W-BYCL001W-B 255 nt-0.28□□□□□ -2.45
MSP1P28737 snR67snR67 82 nt-0.29□□□□□ -2.46
MSP1P28737 YJL113WYJL113W 4647 nt-0.3□□□□□ -2.46
MSP1P28737 YLR294CYLR294C 330 nt-0.36□□□□□ -2.47
MSP1P28737 tA(UGC)QtA(UGC)Q 76 nt-0.38□□□□□ -2.47
MSP1P28737 YOR225WYOR225W 330 nt-0.41□□□□□ -2.48
MSP1P28737 YHR180C-BYHR180C-B 105 nt-0.43□□□□□ -2.48
MSP1P28737 YML054C-AYML054C-A 159 nt-0.43□□□□□ -2.48
MSP1P28737 URB1YKL014C 5295 nt-0.45□□□□□ -2.48
MSP1P28737 YOL083C-AYOL083C-A 141 nt-0.48□□□□□ -2.49
MSP1P28737 YHL009W-BYHL009W-B 5409 nt-0.51□□□□□ -2.49
MSP1P28737 SKI7YOR076C 2244 nt-0.54□□□□□ -2.5
MSP1P28737 YNL170WYNL170W 396 nt-0.56□□□□□ -2.5
MSP1P28737 YBL100W-CYBL100W-C 120 nt-0.58□□□□□ -2.5
MSP1P28737 snR161snR161 161 nt-0.59□□□□□ -2.5
MSP1P28737 YAL037C-AYAL037C-A 93 nt-0.6□□□□□ -2.51
MSP1P28737 YBL071C-BYBL071C-B 99 nt-0.62□□□□□ -2.51
MSP1P28737 RPL41AYDL184C 78 nt-0.64□□□□□ -2.51
MSP1P28737 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
MSP1P28737 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
MSP1P28737 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
MSP1P28737 YOL164W-AYOL164W-A 183 nt-0.66□□□□□ -2.52
MSP1P28737 snR81snR81 201 nt-0.67□□□□□ -2.52
MSP1P28737 ATP8Q0080 147 nt-0.67□□□□□ -2.52
MSP1P28737 YBR296C-AYBR296C-A 120 nt-0.67□□□□□ -2.52
MSP1P28737 YGL041C-BYGL041C-B 183 nt-0.69□□□□□ -2.52
MSP1P28737 snR33snR33 183 nt-0.7□□□□□ -2.52
MSP1P28737 snR47snR47 99 nt-0.7□□□□□ -2.52
MSP1P28737 YNL103W-AYNL103W-A 90 nt-0.71□□□□□ -2.52
MSP1P28737 snR61snR61 90 nt-0.73□□□□□ -2.53
MSP1P28737 YGR240C-AYGR240C-A 201 nt-0.73□□□□□ -2.53
MSP1P28737 YBR109W-AYBR109W-A 225 nt-0.75□□□□□ -2.53
MSP1P28737 YKL106C-AYKL106C-A 120 nt-0.76□□□□□ -2.53
MSP1P28737 Q0092Q0092 141 nt-0.82□□□□□ -2.54
MSP1P28737 YOR376W-AYOR376W-A 156 nt-0.84□□□□□ -2.54
MSP1P28737 tS(GCU)Q1tS(GCU)Q1 86 nt-0.9□□□□□ -2.55
MSP1P28737 snR38snR38 95 nt-0.9□□□□□ -2.55
MSP1P28737 YOR316C-AYOR316C-A 210 nt-0.94□□□□□ -2.56
MSP1P28737 YDR034C-AYDR034C-A 177 nt-0.95□□□□□ -2.56
MSP1P28737 tP(UGG)QtP(UGG)Q 72 nt-0.97□□□□□ -2.56
MSP1P28737 YKL225WYKL225W 348 nt-0.97□□□□□ -2.56
MSP1P28737 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
MSP1P28737 snR62snR62 100 nt-0.99□□□□□ -2.57
MSP1P28737 Q0143Q0143 153 nt-1□□□□□ -2.57
MSP1P28737 YNR077CYNR077C 255 nt-1.05□□□□□ -2.58
MSP1P28737 CDC65tQ(CUG)M 72 nt-1.07□□□□□ -2.58
MSP1P28737 snR77snR77 88 nt-1.09□□□□□ -2.58
MSP1P28737 YMR326CYMR326C 309 nt-1.09□□□□□ -2.58
MSP1P28737 YMR315W-AYMR315W-A 108 nt-1.11□□□□□ -2.59
MSP1P28737 snR85snR85 171 nt-1.16□□□□□ -2.6
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms