Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN3P26045 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.34■□□□□ 0.85
PTPN3P26045 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PTPN3P26045 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.34■□□□□ 0.85
PTPN3P26045 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN3P26045 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN3P26045 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN3P26045 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN3P26045 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.33■□□□□ 0.85
PTPN3P26045 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN3P26045 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN3P26045 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN3P26045 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN3P26045 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN3P26045 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN3P26045 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.33■□□□□ 0.85
PTPN3P26045 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.33■□□□□ 0.85
PTPN3P26045 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.33■□□□□ 0.85
PTPN3P26045 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.33■□□□□ 0.84
PTPN3P26045 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PTPN3P26045 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN3P26045 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN3P26045 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN3P26045 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN3P26045 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 AL138781.1-201ENST00000566567 1274 ntBASIC20.32■□□□□ 0.84
PTPN3P26045 AL109923.1-201ENST00000618799 583 ntBASIC20.32■□□□□ 0.84
PTPN3P26045 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN3P26045 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PTPN3P26045 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN3P26045 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN3P26045 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.31■□□□□ 0.84
PTPN3P26045 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.31■□□□□ 0.84
PTPN3P26045 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN3P26045 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPN3P26045 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN3P26045 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 AC098934.4-201ENST00000564127 592 ntBASIC20.31■□□□□ 0.84
PTPN3P26045 MIR4758-201ENST00000577688 71 ntBASIC20.31■□□□□ 0.84
PTPN3P26045 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 MYC-209ENST00000641252 345 ntBASIC20.31■□□□□ 0.84
PTPN3P26045 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN3P26045 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN3P26045 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN3P26045 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTPN3P26045 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN3P26045 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.3■□□□□ 0.84
PTPN3P26045 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PTPN3P26045 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PTPN3P26045 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN3P26045 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms