Protein–RNA interactions for Protein: P25359

RRP43, Exosome complex component RRP43, yeastyeast

Predicted RBP Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP43P25359 tT(AGU)O1tT(AGU)O1 73 nt0.69□□□□□ -2.3
RRP43P25359 tT(AGU)O2tT(AGU)O2 73 nt0.69□□□□□ -2.3
RRP43P25359 RPS26AYGL189C 360 nt0.68□□□□□ -2.3
RRP43P25359 YDR371C-AYDR371C-A 105 nt0.67□□□□□ -2.3
RRP43P25359 PAU12YGR294W 363 nt0.67□□□□□ -2.3
RRP43P25359 YMR272W-AYMR272W-A 114 nt0.67□□□□□ -2.3
RRP43P25359 YNL103W-AYNL103W-A 90 nt0.67□□□□□ -2.3
RRP43P25359 YBR178WYBR178W 375 nt0.66□□□□□ -2.3
RRP43P25359 UTP10YJL109C 5310 nt0.65□□□□□ -2.31
RRP43P25359 YIL142C-AYIL142C-A 333 nt0.65□□□□□ -2.31
RRP43P25359 MLP1YKR095W 5628 nt0.65□□□□□ -2.31
RRP43P25359 snR61snR61 90 nt0.64□□□□□ -2.31
RRP43P25359 RCO1YMR075W 2055 nt0.64□□□□□ -2.31
RRP43P25359 SEC10YLR166C 2616 nt0.64□□□□□ -2.31
RRP43P25359 TFB5YDR079C-A 219 nt0.61□□□□□ -2.31
RRP43P25359 YBR196C-AYBR196C-A 150 nt0.61□□□□□ -2.31
RRP43P25359 EST1YLR233C 2100 nt0.61□□□□□ -2.31
RRP43P25359 YJL077W-AYJL077W-A 87 nt0.6□□□□□ -2.31
RRP43P25359 ORC3YLL004W 1851 nt0.59□□□□□ -2.31
RRP43P25359 snR69snR69 101 nt0.59□□□□□ -2.31
RRP43P25359 SBH1YER087C-B 249 nt0.58□□□□□ -2.32
RRP43P25359 YPL060C-AYPL060C-A 3315 nt0.58□□□□□ -2.32
RRP43P25359 tD(GUC)QtD(GUC)Q 75 nt0.57□□□□□ -2.32
RRP43P25359 YGL041C-BYGL041C-B 183 nt0.54□□□□□ -2.32
RRP43P25359 YMR326CYMR326C 309 nt0.54□□□□□ -2.32
RRP43P25359 RDS3YPR094W 324 nt0.54□□□□□ -2.32
RRP43P25359 YMR160WYMR160W 2451 nt0.51□□□□□ -2.33
RRP43P25359 YBL100W-BYBL100W-B 5313 nt0.51□□□□□ -2.33
RRP43P25359 tQ(UUG)QtQ(UUG)Q 76 nt0.5□□□□□ -2.33
RRP43P25359 IQG1YPL242C 4488 nt0.48□□□□□ -2.33
RRP43P25359 YDR524C-AYDR524C-A 120 nt0.48□□□□□ -2.33
RRP43P25359 YAL037C-AYAL037C-A 93 nt0.48□□□□□ -2.33
RRP43P25359 YLR286W-AYLR286W-A 135 nt0.48□□□□□ -2.33
RRP43P25359 YOR186C-AYOR186C-A 210 nt0.48□□□□□ -2.33
RRP43P25359 ESP1YGR098C 4893 nt0.47□□□□□ -2.33
RRP43P25359 YDL159C-BYDL159C-B 177 nt0.46□□□□□ -2.34
RRP43P25359 YBL109WYBL109W 336 nt0.45□□□□□ -2.34
RRP43P25359 snR81snR81 201 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)BtF(GAA)B 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)FtF(GAA)F 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)GtF(GAA)G 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)H1tF(GAA)H1 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)H2tF(GAA)H2 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)MtF(GAA)M 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)P1tF(GAA)P1 73 nt0.44□□□□□ -2.34
RRP43P25359 tF(GAA)P2tF(GAA)P2 73 nt0.44□□□□□ -2.34
RRP43P25359 YKL145W-AYKL145W-A 93 nt0.44□□□□□ -2.34
RRP43P25359 YLR299C-AYLR299C-A 93 nt0.44□□□□□ -2.34
RRP43P25359 YOL083C-AYOL083C-A 141 nt0.44□□□□□ -2.34
RRP43P25359 MYO1YHR023W 5787 nt0.43□□□□□ -2.34
RRP43P25359 YHR217CYHR217C 462 nt0.43□□□□□ -2.34
RRP43P25359 MLP2YIL149C 5040 nt0.39□□□□□ -2.35
RRP43P25359 YBL071C-BYBL071C-B 99 nt0.38□□□□□ -2.35
RRP43P25359 YER090C-AYER090C-A 90 nt0.36□□□□□ -2.35
RRP43P25359 FMP27YLR454W 7887 nt0.35□□□□□ -2.35
RRP43P25359 AI1Q0050 2505 nt0.34□□□□□ -2.35
RRP43P25359 YNL054W-BYNL054W-B 5250 nt0.34□□□□□ -2.36
RRP43P25359 YBL100W-CYBL100W-C 120 nt0.33□□□□□ -2.36
RRP43P25359 YOL014WYOL014W 375 nt0.32□□□□□ -2.36
RRP43P25359 UTP20YBL004W 7482 nt0.31□□□□□ -2.36
RRP43P25359 YOL164W-AYOL164W-A 183 nt0.31□□□□□ -2.36
RRP43P25359 snR50snR50 90 nt0.31□□□□□ -2.36
RRP43P25359 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
RRP43P25359 tS(GCU)Q1tS(GCU)Q1 86 nt0.27□□□□□ -2.37
RRP43P25359 YHR180C-BYHR180C-B 105 nt0.26□□□□□ -2.37
RRP43P25359 SOV1YMR066W 2697 nt0.24□□□□□ -2.37
RRP43P25359 YDL247W-AYDL247W-A 75 nt0.23□□□□□ -2.37
RRP43P25359 YGR240C-AYGR240C-A 201 nt0.23□□□□□ -2.37
RRP43P25359 YML054C-AYML054C-A 159 nt0.23□□□□□ -2.37
RRP43P25359 snR62snR62 100 nt0.21□□□□□ -2.38
RRP43P25359 snR67snR67 82 nt0.2□□□□□ -2.38
RRP43P25359 snR47snR47 99 nt0.2□□□□□ -2.38
RRP43P25359 snR128snR128 126 nt0.19□□□□□ -2.38
RRP43P25359 YDR034C-AYDR034C-A 177 nt0.13□□□□□ -2.39
RRP43P25359 YML100W-AYML100W-A 174 nt0.13□□□□□ -2.39
RRP43P25359 RPL41AYDL184C 78 nt0.11□□□□□ -2.39
RRP43P25359 YLL066W-BYLL066W-B 171 nt0.08□□□□□ -2.4
RRP43P25359 YBR296C-AYBR296C-A 120 nt0.08□□□□□ -2.4
RRP43P25359 YER078W-AYER078W-A 165 nt0.07□□□□□ -2.4
RRP43P25359 YBR109W-AYBR109W-A 225 nt0.07□□□□□ -2.4
RRP43P25359 THO2YNL139C 4794 nt0.07□□□□□ -2.4
RRP43P25359 snR45snR45 172 nt0.06□□□□□ -2.4
RRP43P25359 PAU9YBL108C-A 129 nt-0.02□□□□□ -2.41
RRP43P25359 SKI7YOR076C 2244 nt-0.05□□□□□ -2.42
RRP43P25359 YKL225WYKL225W 348 nt-0.05□□□□□ -2.42
RRP43P25359 snR38snR38 95 nt-0.05□□□□□ -2.42
RRP43P25359 SBH2YER019C-A 267 nt-0.12□□□□□ -2.43
RRP43P25359 tA(UGC)QtA(UGC)Q 76 nt-0.16□□□□□ -2.44
RRP43P25359 snR64snR64 101 nt-0.17□□□□□ -2.44
RRP43P25359 YKL106C-AYKL106C-A 120 nt-0.21□□□□□ -2.44
RRP43P25359 YOR376W-AYOR376W-A 156 nt-0.33□□□□□ -2.46
RRP43P25359 snR53snR53 91 nt-0.34□□□□□ -2.46
RRP43P25359 snR161snR161 161 nt-0.38□□□□□ -2.47
RRP43P25359 YDL159W-AYDL159W-A 132 nt-0.39□□□□□ -2.47
RRP43P25359 YOR316C-AYOR316C-A 210 nt-0.4□□□□□ -2.47
RRP43P25359 YGR122C-AYGR122C-A 129 nt-0.41□□□□□ -2.48
RRP43P25359 YJL113WYJL113W 4647 nt-0.53□□□□□ -2.49
RRP43P25359 YDL114W-AYDL114W-A 114 nt-0.54□□□□□ -2.5
RRP43P25359 YHL009W-BYHL009W-B 5409 nt-0.56□□□□□ -2.5
RRP43P25359 snR77snR77 88 nt-0.59□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms