Protein–RNA interactions for Protein: P25037

UBP1, Ubiquitin carboxyl-terminal hydrolase 1, yeastyeast

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP1P25037 YLR286W-AYLR286W-A 135 nt1.67□□□□□ -2.14
UBP1P25037 ULP2YIL031W 3105 nt1.64□□□□□ -2.15
UBP1P25037 MSN5YDR335W 3675 nt1.64□□□□□ -2.15
UBP1P25037 SIP4YJL089W 2490 nt1.62□□□□□ -2.15
UBP1P25037 tD(GUC)QtD(GUC)Q 75 nt1.62□□□□□ -2.15
UBP1P25037 snR47snR47 99 nt1.62□□□□□ -2.15
UBP1P25037 PET127YOR017W 2403 nt1.61□□□□□ -2.15
UBP1P25037 YOL014WYOL014W 375 nt1.59□□□□□ -2.15
UBP1P25037 EST1YLR233C 2100 nt1.58□□□□□ -2.16
UBP1P25037 HKR1YDR420W 5409 nt1.57□□□□□ -2.16
UBP1P25037 BUD3YCL014W 4911 nt1.54□□□□□ -2.16
UBP1P25037 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
UBP1P25037 CSE1YGL238W 2883 nt1.54□□□□□ -2.16
UBP1P25037 ORC3YLL004W 1851 nt1.53□□□□□ -2.16
UBP1P25037 YLL006W-AYLL006W-A 177 nt1.52□□□□□ -2.17
UBP1P25037 YLR299C-AYLR299C-A 93 nt1.52□□□□□ -2.17
UBP1P25037 SPT7YBR081C 3999 nt1.52□□□□□ -2.17
UBP1P25037 snR69snR69 101 nt1.51□□□□□ -2.17
UBP1P25037 YDL159C-BYDL159C-B 177 nt1.49□□□□□ -2.17
UBP1P25037 RDS3YPR094W 324 nt1.46□□□□□ -2.18
UBP1P25037 NIP1YMR309C 2439 nt1.44□□□□□ -2.18
UBP1P25037 snR53snR53 91 nt1.4□□□□□ -2.19
UBP1P25037 snR64snR64 101 nt1.39□□□□□ -2.19
UBP1P25037 BUL2YML111W 2763 nt1.38□□□□□ -2.19
UBP1P25037 NST1YNL091W 3723 nt1.38□□□□□ -2.19
UBP1P25037 YJL077W-AYJL077W-A 87 nt1.37□□□□□ -2.19
UBP1P25037 YHR180C-BYHR180C-B 105 nt1.35□□□□□ -2.19
UBP1P25037 YMR160WYMR160W 2451 nt1.34□□□□□ -2.2
UBP1P25037 RKR1YMR247C 4689 nt1.34□□□□□ -2.2
UBP1P25037 tQ(UUG)QtQ(UUG)Q 76 nt1.33□□□□□ -2.2
UBP1P25037 YKL145W-AYKL145W-A 93 nt1.32□□□□□ -2.2
UBP1P25037 YKL225WYKL225W 348 nt1.31□□□□□ -2.2
UBP1P25037 YML054C-AYML054C-A 159 nt1.31□□□□□ -2.2
UBP1P25037 YOR192C-BYOR192C-B 5313 nt1.28□□□□□ -2.2
UBP1P25037 snR50snR50 90 nt1.28□□□□□ -2.2
UBP1P25037 YPL060C-AYPL060C-A 3315 nt1.27□□□□□ -2.21
UBP1P25037 RPL41AYDL184C 78 nt1.27□□□□□ -2.21
UBP1P25037 YBR109W-AYBR109W-A 225 nt1.27□□□□□ -2.21
UBP1P25037 MYO1YHR023W 5787 nt1.24□□□□□ -2.21
UBP1P25037 VAM6YDL077C 3150 nt1.23□□□□□ -2.21
UBP1P25037 YJR029WYJR029W 5268 nt1.22□□□□□ -2.21
UBP1P25037 YPR137C-BYPR137C-B 5268 nt1.22□□□□□ -2.21
UBP1P25037 YBR296C-AYBR296C-A 120 nt1.2□□□□□ -2.22
UBP1P25037 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
UBP1P25037 YDR371C-AYDR371C-A 105 nt1.16□□□□□ -2.22
UBP1P25037 YPR117WYPR117W 7470 nt1.16□□□□□ -2.22
UBP1P25037 PET111YMR257C 2403 nt1.14□□□□□ -2.23
UBP1P25037 YER090C-AYER090C-A 90 nt1.14□□□□□ -2.23
UBP1P25037 snR38snR38 95 nt1.14□□□□□ -2.23
UBP1P25037 BEM2YER155C 6504 nt1.12□□□□□ -2.23
UBP1P25037 EMT1tM(CAU)D 73 nt1.12□□□□□ -2.23
UBP1P25037 EMT5tM(CAU)J1 73 nt1.12□□□□□ -2.23
UBP1P25037 EMT3tM(CAU)J2 73 nt1.12□□□□□ -2.23
UBP1P25037 EMT4tM(CAU)M 73 nt1.12□□□□□ -2.23
UBP1P25037 EMT2tM(CAU)O2 73 nt1.12□□□□□ -2.23
UBP1P25037 YNL054W-BYNL054W-B 5250 nt1.07□□□□□ -2.24
UBP1P25037 AI1Q0050 2505 nt1.07□□□□□ -2.24
UBP1P25037 THO2YNL139C 4794 nt1.05□□□□□ -2.24
UBP1P25037 SKI7YOR076C 2244 nt1.04□□□□□ -2.24
UBP1P25037 YDL159W-AYDL159W-A 132 nt1.04□□□□□ -2.24
UBP1P25037 LTE1YAL024C 4308 nt1.03□□□□□ -2.25
UBP1P25037 snR67snR67 82 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)BtT(AGU)B 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)CtT(AGU)C 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)DtT(AGU)D 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)HtT(AGU)H 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)I1tT(AGU)I1 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)I2tT(AGU)I2 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)JtT(AGU)J 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)N1tT(AGU)N1 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)N2tT(AGU)N2 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)O1tT(AGU)O1 73 nt0.95□□□□□ -2.26
UBP1P25037 tT(AGU)O2tT(AGU)O2 73 nt0.95□□□□□ -2.26
UBP1P25037 YLR149C-AYLR149C-A 87 nt0.91□□□□□ -2.26
UBP1P25037 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
UBP1P25037 YBL100W-BYBL100W-B 5313 nt0.9□□□□□ -2.27
UBP1P25037 YGR122C-AYGR122C-A 129 nt0.9□□□□□ -2.27
UBP1P25037 MLP1YKR095W 5628 nt0.87□□□□□ -2.27
UBP1P25037 FMP27YLR454W 7887 nt0.86□□□□□ -2.27
UBP1P25037 YER078W-AYER078W-A 165 nt0.82□□□□□ -2.28
UBP1P25037 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
UBP1P25037 YKL096C-BYKL096C-B 150 nt0.78□□□□□ -2.28
UBP1P25037 YOR186C-AYOR186C-A 210 nt0.77□□□□□ -2.29
UBP1P25037 UTP10YJL109C 5310 nt0.76□□□□□ -2.29
UBP1P25037 YMR272W-AYMR272W-A 114 nt0.72□□□□□ -2.29
UBP1P25037 MLP2YIL149C 5040 nt0.67□□□□□ -2.3
UBP1P25037 YKL106C-AYKL106C-A 120 nt0.65□□□□□ -2.31
UBP1P25037 YML100W-AYML100W-A 174 nt0.6□□□□□ -2.31
UBP1P25037 snR75snR75 89 nt0.56□□□□□ -2.32
UBP1P25037 SOV1YMR066W 2697 nt0.5□□□□□ -2.33
UBP1P25037 YDL114W-AYDL114W-A 114 nt0.49□□□□□ -2.33
UBP1P25037 snR128snR128 126 nt0.46□□□□□ -2.34
UBP1P25037 ESP1YGR098C 4893 nt0.42□□□□□ -2.34
UBP1P25037 YOR376W-AYOR376W-A 156 nt0.41□□□□□ -2.34
UBP1P25037 PAU9YBL108C-A 129 nt0.39□□□□□ -2.35
UBP1P25037 tV(UAC)QtV(UAC)Q 76 nt0.38□□□□□ -2.35
UBP1P25037 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
UBP1P25037 YOR316C-AYOR316C-A 210 nt0.31□□□□□ -2.36
UBP1P25037 SBH2YER019C-A 267 nt0.22□□□□□ -2.37
UBP1P25037 snR77snR77 88 nt0.21□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms