Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.6■□□□□ 0.57
CHMP24386 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHMP24386 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHMP24386 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP24386 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 MCRIP2P1-201ENST00000394346 511 ntBASIC18.59■□□□□ 0.57
CHMP24386 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP24386 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.59■□□□□ 0.57
CHMP24386 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CHMP24386 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.59■□□□□ 0.57
CHMP24386 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHMP24386 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.59■□□□□ 0.57
CHMP24386 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHMP24386 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHMP24386 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CHMP24386 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CHMP24386 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHMP24386 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP24386 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP24386 AL138781.1-201ENST00000566567 1274 ntBASIC18.58■□□□□ 0.56
CHMP24386 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP24386 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.58■□□□□ 0.56
CHMP24386 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
CHMP24386 AC092118.2-201ENST00000613495 667 ntBASIC18.58■□□□□ 0.56
CHMP24386 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP24386 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CHMP24386 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP24386 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHMP24386 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CHMP24386 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CHMP24386 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.58■□□□□ 0.56
CHMP24386 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP24386 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMP24386 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHMP24386 AC018445.3-201ENST00000624177 1945 ntBASIC18.57■□□□□ 0.56
CHMP24386 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP24386 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHMP24386 BX276092.2-201ENST00000417668 665 ntBASIC18.57■□□□□ 0.56
CHMP24386 AC069152.1-201ENST00000438030 544 ntBASIC18.57■□□□□ 0.56
CHMP24386 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP24386 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.57■□□□□ 0.56
CHMP24386 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.57■□□□□ 0.56
CHMP24386 AL158211.5-201ENST00000623583 2518 ntBASIC18.57■□□□□ 0.56
CHMP24386 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.57■□□□□ 0.56
CHMP24386 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHMP24386 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.56■□□□□ 0.56
CHMP24386 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.56■□□□□ 0.56
CHMP24386 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHMP24386 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.56■□□□□ 0.56
CHMP24386 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.56■□□□□ 0.56
CHMP24386 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.56■□□□□ 0.56
CHMP24386 CYP2T3P-201ENST00000601990 817 ntBASIC18.56■□□□□ 0.56
CHMP24386 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CHMP24386 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHMP24386 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms