Protein–RNA interactions for Protein: P12954

SRS2, ATP-dependent DNA helicase SRS2, yeastyeast

Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRS2P12954 YLL006W-AYLL006W-A 177 nt1.42□□□□□ -2.18
SRS2P12954 tD(GUC)QtD(GUC)Q 75 nt1.41□□□□□ -2.18
SRS2P12954 snR47snR47 99 nt1.41□□□□□ -2.18
SRS2P12954 YPL060C-AYPL060C-A 3315 nt1.39□□□□□ -2.19
SRS2P12954 EST1YLR233C 2100 nt1.39□□□□□ -2.19
SRS2P12954 CSE1YGL238W 2883 nt1.38□□□□□ -2.19
SRS2P12954 snR69snR69 101 nt1.37□□□□□ -2.19
SRS2P12954 SIP4YJL089W 2490 nt1.36□□□□□ -2.19
SRS2P12954 YNL054W-BYNL054W-B 5250 nt1.35□□□□□ -2.19
SRS2P12954 NIP1YMR309C 2439 nt1.31□□□□□ -2.2
SRS2P12954 snR53snR53 91 nt1.3□□□□□ -2.2
SRS2P12954 BEM2YER155C 6504 nt1.3□□□□□ -2.2
SRS2P12954 RKR1YMR247C 4689 nt1.29□□□□□ -2.2
SRS2P12954 YLR299C-AYLR299C-A 93 nt1.29□□□□□ -2.2
SRS2P12954 RDS3YPR094W 324 nt1.29□□□□□ -2.2
SRS2P12954 NST1YNL091W 3723 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)BtF(GAA)B 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)FtF(GAA)F 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)GtF(GAA)G 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)H1tF(GAA)H1 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)H2tF(GAA)H2 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)MtF(GAA)M 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)P1tF(GAA)P1 73 nt1.28□□□□□ -2.2
SRS2P12954 tF(GAA)P2tF(GAA)P2 73 nt1.28□□□□□ -2.2
SRS2P12954 SCC2YDR180W 4482 nt1.27□□□□□ -2.21
SRS2P12954 snR64snR64 101 nt1.27□□□□□ -2.21
SRS2P12954 YDL159C-BYDL159C-B 177 nt1.27□□□□□ -2.21
SRS2P12954 YJL077W-AYJL077W-A 87 nt1.27□□□□□ -2.21
SRS2P12954 BUL2YML111W 2763 nt1.27□□□□□ -2.21
SRS2P12954 YPR117WYPR117W 7470 nt1.25□□□□□ -2.21
SRS2P12954 YJR029WYJR029W 5268 nt1.22□□□□□ -2.21
SRS2P12954 YPR137C-BYPR137C-B 5268 nt1.22□□□□□ -2.21
SRS2P12954 YML054C-AYML054C-A 159 nt1.2□□□□□ -2.22
SRS2P12954 VAM6YDL077C 3150 nt1.19□□□□□ -2.22
SRS2P12954 YBR109W-AYBR109W-A 225 nt1.19□□□□□ -2.22
SRS2P12954 snR38snR38 95 nt1.19□□□□□ -2.22
SRS2P12954 YOR192C-BYOR192C-B 5313 nt1.19□□□□□ -2.22
SRS2P12954 YKL225WYKL225W 348 nt1.18□□□□□ -2.22
SRS2P12954 LTE1YAL024C 4308 nt1.15□□□□□ -2.23
SRS2P12954 tQ(UUG)QtQ(UUG)Q 76 nt1.12□□□□□ -2.23
SRS2P12954 DOP1YDR141C 5097 nt1.12□□□□□ -2.23
SRS2P12954 PET111YMR257C 2403 nt1.11□□□□□ -2.23
SRS2P12954 YDR371C-AYDR371C-A 105 nt1.1□□□□□ -2.23
SRS2P12954 YOL014WYOL014W 375 nt1.1□□□□□ -2.23
SRS2P12954 AI1Q0050 2505 nt1.09□□□□□ -2.23
SRS2P12954 YDL159W-AYDL159W-A 132 nt1.07□□□□□ -2.24
SRS2P12954 YHR180C-BYHR180C-B 105 nt1.07□□□□□ -2.24
SRS2P12954 snR50snR50 90 nt1.07□□□□□ -2.24
SRS2P12954 UTP20YBL004W 7482 nt1.05□□□□□ -2.24
SRS2P12954 RPL41AYDL184C 78 nt1.03□□□□□ -2.24
SRS2P12954 YBR296C-AYBR296C-A 120 nt1.02□□□□□ -2.25
SRS2P12954 EMT1tM(CAU)D 73 nt1.01□□□□□ -2.25
SRS2P12954 EMT5tM(CAU)J1 73 nt1.01□□□□□ -2.25
SRS2P12954 EMT3tM(CAU)J2 73 nt1.01□□□□□ -2.25
SRS2P12954 EMT4tM(CAU)M 73 nt1.01□□□□□ -2.25
SRS2P12954 EMT2tM(CAU)O2 73 nt1.01□□□□□ -2.25
SRS2P12954 YER090C-AYER090C-A 90 nt0.99□□□□□ -2.25
SRS2P12954 YKL145W-AYKL145W-A 93 nt0.99□□□□□ -2.25
SRS2P12954 YMR160WYMR160W 2451 nt0.97□□□□□ -2.25
SRS2P12954 YLR149C-AYLR149C-A 87 nt0.96□□□□□ -2.26
SRS2P12954 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
SRS2P12954 YBL100W-BYBL100W-B 5313 nt0.93□□□□□ -2.26
SRS2P12954 MLP2YIL149C 5040 nt0.9□□□□□ -2.27
SRS2P12954 SKI7YOR076C 2244 nt0.88□□□□□ -2.27
SRS2P12954 YGR122C-AYGR122C-A 129 nt0.87□□□□□ -2.27
SRS2P12954 YPR159C-AYPR159C-A 102 nt0.82□□□□□ -2.28
SRS2P12954 IQG1YPL242C 4488 nt0.8□□□□□ -2.28
SRS2P12954 THO2YNL139C 4794 nt0.79□□□□□ -2.28
SRS2P12954 snR67snR67 82 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)BtT(AGU)B 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)CtT(AGU)C 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)DtT(AGU)D 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)HtT(AGU)H 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)I1tT(AGU)I1 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)I2tT(AGU)I2 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)JtT(AGU)J 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)N1tT(AGU)N1 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)N2tT(AGU)N2 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)O1tT(AGU)O1 73 nt0.79□□□□□ -2.28
SRS2P12954 tT(AGU)O2tT(AGU)O2 73 nt0.79□□□□□ -2.28
SRS2P12954 YKL096C-BYKL096C-B 150 nt0.77□□□□□ -2.29
SRS2P12954 YOR186C-AYOR186C-A 210 nt0.77□□□□□ -2.29
SRS2P12954 YMR272W-AYMR272W-A 114 nt0.7□□□□□ -2.3
SRS2P12954 UTP10YJL109C 5310 nt0.7□□□□□ -2.3
SRS2P12954 YER078W-AYER078W-A 165 nt0.66□□□□□ -2.3
SRS2P12954 FMP27YLR454W 7887 nt0.61□□□□□ -2.31
SRS2P12954 snR75snR75 89 nt0.6□□□□□ -2.31
SRS2P12954 SOV1YMR066W 2697 nt0.59□□□□□ -2.32
SRS2P12954 YML100W-AYML100W-A 174 nt0.58□□□□□ -2.32
SRS2P12954 ESP1YGR098C 4893 nt0.57□□□□□ -2.32
SRS2P12954 YKL106C-AYKL106C-A 120 nt0.56□□□□□ -2.32
SRS2P12954 tV(UAC)QtV(UAC)Q 76 nt0.51□□□□□ -2.33
SRS2P12954 YDL114W-AYDL114W-A 114 nt0.49□□□□□ -2.33
SRS2P12954 YOR376W-AYOR376W-A 156 nt0.49□□□□□ -2.33
SRS2P12954 YOL013W-AYOL013W-A 192 nt0.41□□□□□ -2.34
SRS2P12954 snR128snR128 126 nt0.37□□□□□ -2.35
SRS2P12954 YOR316C-AYOR316C-A 210 nt0.3□□□□□ -2.36
SRS2P12954 snR77snR77 88 nt0.28□□□□□ -2.36
SRS2P12954 PAU9YBL108C-A 129 nt0.25□□□□□ -2.37
SRS2P12954 SBH2YER019C-A 267 nt0.21□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms