Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH1P12830 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.42■□□□□ 0.7
CDH1P12830 MIR4758-201ENST00000577688 71 ntBASIC19.42■□□□□ 0.7
CDH1P12830 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH1P12830 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.42■□□□□ 0.7
CDH1P12830 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDH1P12830 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH1P12830 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH1P12830 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH1P12830 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH1P12830 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH1P12830 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CDH1P12830 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CDH1P12830 ID1-201ENST00000376105 1233 ntBASIC19.41■□□□□ 0.7
CDH1P12830 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDH1P12830 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH1P12830 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.41■□□□□ 0.7
CDH1P12830 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH1P12830 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH1P12830 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH1P12830 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH1P12830 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CDH1P12830 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 AL355802.2-201ENST00000402069 882 ntBASIC19.4■□□□□ 0.7
CDH1P12830 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH1P12830 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
CDH1P12830 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH1P12830 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
CDH1P12830 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH1P12830 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH1P12830 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.39■□□□□ 0.7
CDH1P12830 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH1P12830 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH1P12830 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.39■□□□□ 0.69
CDH1P12830 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CDH1P12830 AC091874.3-201ENST00000512672 1195 ntBASIC19.39■□□□□ 0.69
CDH1P12830 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH1P12830 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CDH1P12830 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH1P12830 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH1P12830 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.39■□□□□ 0.69
CDH1P12830 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH1P12830 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH1P12830 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH1P12830 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.38■□□□□ 0.69
CDH1P12830 PTBP1P-201ENST00000554374 1601 ntBASIC19.38■□□□□ 0.69
CDH1P12830 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDH1P12830 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.38■□□□□ 0.69
CDH1P12830 AC142086.2-201ENST00000569753 217 ntBASIC19.38■□□□□ 0.69
CDH1P12830 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms