Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 MESTP1-201ENST00000404287 994 ntBASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 WWOX-216ENST00000569818 525 ntBASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 AL049796.1-201ENST00000565336 1766 ntBASIC26.51■■□□□ 1.83
CSB-PGBD3P0DP91 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 C1QL1P1-201ENST00000568105 661 ntBASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CSB-PGBD3P0DP91 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 KRT8P17-201ENST00000453110 1448 ntBASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 ECEL1P2-202ENST00000465689 757 ntBASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 ABBA01031674.1-201ENST00000635145 728 ntBASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CSB-PGBD3P0DP91 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 PPP1R14BP5-201ENST00000440334 435 ntBASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 AC006011.2-201ENST00000621313 1158 ntBASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
CSB-PGBD3P0DP91 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 FBXW4P1-201ENST00000426721 2239 ntBASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 AL445675.2-201ENST00000620291 557 ntBASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC26.47■■□□□ 1.83
CSB-PGBD3P0DP91 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 B3GAT3P1-201ENST00000471720 806 ntBASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 AL121603.2-201ENST00000557373 2117 ntBASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 AC026271.3-201ENST00000571884 352 ntBASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.46■■□□□ 1.83
CSB-PGBD3P0DP91 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC26.45■■□□□ 1.83
CSB-PGBD3P0DP91 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms