Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
HOXC6P09630 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HOXC6P09630 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
HOXC6P09630 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HOXC6P09630 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HOXC6P09630 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HOXC6P09630 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
HOXC6P09630 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
HOXC6P09630 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
HOXC6P09630 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HOXC6P09630 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
HOXC6P09630 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.63■■□□□ 1.21
HOXC6P09630 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.63■■□□□ 1.21
HOXC6P09630 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.63■■□□□ 1.21
HOXC6P09630 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
HOXC6P09630 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HOXC6P09630 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 MESTP1-201ENST00000404287 994 ntBASIC22.62■■□□□ 1.21
HOXC6P09630 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
HOXC6P09630 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.62■■□□□ 1.21
HOXC6P09630 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.62■■□□□ 1.21
HOXC6P09630 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 AC026271.3-201ENST00000571884 352 ntBASIC22.62■■□□□ 1.21
HOXC6P09630 AL031985.4-201ENST00000642138 673 ntBASIC22.62■■□□□ 1.21
HOXC6P09630 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.62■■□□□ 1.21
HOXC6P09630 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC22.62■■□□□ 1.21
HOXC6P09630 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 AC121338.2-201ENST00000622535 1744 ntBASIC22.62■■□□□ 1.21
HOXC6P09630 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HOXC6P09630 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HOXC6P09630 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HOXC6P09630 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
HOXC6P09630 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.61■■□□□ 1.21
HOXC6P09630 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 CALM3-202ENST00000391918 702 ntTSL 2 BASIC22.61■■□□□ 1.21
HOXC6P09630 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC22.61■■□□□ 1.21
HOXC6P09630 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.61■■□□□ 1.21
HOXC6P09630 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
HOXC6P09630 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 AL445675.2-201ENST00000620291 557 ntBASIC22.61■■□□□ 1.21
HOXC6P09630 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
HOXC6P09630 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HOXC6P09630 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.61■■□□□ 1.21
HOXC6P09630 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 AC104076.2-201ENST00000448912 469 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 DUX4L26-201ENST00000489078 1255 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC22.6■■□□□ 1.21
HOXC6P09630 C1QL1P1-201ENST00000568105 661 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 AP005242.2-201ENST00000580065 1175 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC22.6■■□□□ 1.21
HOXC6P09630 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
HOXC6P09630 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
HOXC6P09630 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.6■■□□□ 1.21
HOXC6P09630 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.6■■□□□ 1.21
HOXC6P09630 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HOXC6P09630 FSCN1P1-201ENST00000568912 1481 ntBASIC22.6■■□□□ 1.21
HOXC6P09630 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.59■■□□□ 1.21
HOXC6P09630 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.59■■□□□ 1.21
HOXC6P09630 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.59■■□□□ 1.21
HOXC6P09630 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.59■■□□□ 1.21
HOXC6P09630 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.59■■□□□ 1.21
HOXC6P09630 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
HOXC6P09630 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HOXC6P09630 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
HOXC6P09630 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.59■■□□□ 1.21
HOXC6P09630 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.58■■□□□ 1.21
HOXC6P09630 AL049796.1-201ENST00000565336 1766 ntBASIC22.58■■□□□ 1.21
HOXC6P09630 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HOXC6P09630 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms