Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TSPY6P-201ENST00000448518 926 ntBASIC20.68■□□□□ 0.9
CD48P09326 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.68■□□□□ 0.9
CD48P09326 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.68■□□□□ 0.9
CD48P09326 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.68■□□□□ 0.9
CD48P09326 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD48P09326 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.67■□□□□ 0.9
CD48P09326 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.67■□□□□ 0.9
CD48P09326 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.67■□□□□ 0.9
CD48P09326 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD48P09326 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD48P09326 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.67■□□□□ 0.9
CD48P09326 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.66■□□□□ 0.9
CD48P09326 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.66■□□□□ 0.9
CD48P09326 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.66■□□□□ 0.9
CD48P09326 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.66■□□□□ 0.9
CD48P09326 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.66■□□□□ 0.9
CD48P09326 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.66■□□□□ 0.9
CD48P09326 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
CD48P09326 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.66■□□□□ 0.9
CD48P09326 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD48P09326 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.65■□□□□ 0.9
CD48P09326 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.65■□□□□ 0.9
CD48P09326 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 DUSP5P2-201ENST00000426873 1033 ntBASIC20.65■□□□□ 0.9
CD48P09326 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 AC023632.3-201ENST00000521633 145 ntBASIC20.65■□□□□ 0.9
CD48P09326 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.65■□□□□ 0.9
CD48P09326 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
CD48P09326 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.65■□□□□ 0.9
CD48P09326 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.65■□□□□ 0.9
CD48P09326 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.65■□□□□ 0.9
CD48P09326 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CD48P09326 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
CD48P09326 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.64■□□□□ 0.9
CD48P09326 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD48P09326 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CD48P09326 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CD48P09326 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CD48P09326 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CD48P09326 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD48P09326 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.64■□□□□ 0.89
CD48P09326 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CD48P09326 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD48P09326 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CD48P09326 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.64■□□□□ 0.89
CD48P09326 AC098934.4-201ENST00000564127 592 ntBASIC20.64■□□□□ 0.89
CD48P09326 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.64■□□□□ 0.89
CD48P09326 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD48P09326 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CD48P09326 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
CD48P09326 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CD48P09326 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.63■□□□□ 0.89
CD48P09326 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD48P09326 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CD48P09326 KRT16P6-202ENST00000425692 1426 ntBASIC20.63■□□□□ 0.89
CD48P09326 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CD48P09326 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD48P09326 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CD48P09326 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.63■□□□□ 0.89
CD48P09326 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CD48P09326 HLA-G-202ENST00000376815 851 ntBASIC20.63■□□□□ 0.89
CD48P09326 HLA-G-203ENST00000376818 1127 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms