Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RETP07949 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RETP07949 MIR1238-201ENST00000408483 83 ntBASIC20.13■□□□□ 0.81
RETP07949 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.13■□□□□ 0.81
RETP07949 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.13■□□□□ 0.81
RETP07949 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.13■□□□□ 0.81
RETP07949 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.13■□□□□ 0.81
RETP07949 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RETP07949 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
RETP07949 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RETP07949 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.12■□□□□ 0.81
RETP07949 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 AC073508.3-201ENST00000619697 1419 ntBASIC20.12■□□□□ 0.81
RETP07949 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RETP07949 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RETP07949 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.12■□□□□ 0.81
RETP07949 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RETP07949 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.12■□□□□ 0.81
RETP07949 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.12■□□□□ 0.81
RETP07949 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.12■□□□□ 0.81
RETP07949 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.12■□□□□ 0.81
RETP07949 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.12■□□□□ 0.81
RETP07949 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.12■□□□□ 0.81
RETP07949 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RETP07949 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.11■□□□□ 0.81
RETP07949 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RETP07949 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.11■□□□□ 0.81
RETP07949 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RETP07949 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.11■□□□□ 0.81
RETP07949 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.11■□□□□ 0.81
RETP07949 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.11■□□□□ 0.81
RETP07949 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.11■□□□□ 0.81
RETP07949 REXO1L10P-201ENST00000615707 1290 ntBASIC20.11■□□□□ 0.81
RETP07949 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
RETP07949 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.11■□□□□ 0.81
RETP07949 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RETP07949 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.11■□□□□ 0.81
RETP07949 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.1■□□□□ 0.81
RETP07949 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.1■□□□□ 0.81
RETP07949 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.1■□□□□ 0.81
RETP07949 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.1■□□□□ 0.81
RETP07949 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.1■□□□□ 0.81
RETP07949 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RETP07949 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 NBPF21P-201ENST00000425093 1451 ntBASIC20.1■□□□□ 0.81
RETP07949 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETP07949 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms