Protein–RNA interactions for Protein: P07560

SEC4, Ras-related protein SEC4, yeastyeast

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEC4P07560 snR39BsnR39B 96 nt-1.09□□□□□ -2.58
SEC4P07560 tF(GAA)QtF(GAA)Q 75 nt-1.1□□□□□ -2.59
SEC4P07560 RDS3YPR094W 324 nt-1.1□□□□□ -2.59
SEC4P07560 snR50snR50 90 nt-1.1□□□□□ -2.59
SEC4P07560 YPR012WYPR012W 255 nt-1.11□□□□□ -2.59
SEC4P07560 YER181CYER181C 324 nt-1.12□□□□□ -2.59
SEC4P07560 snR55snR55 98 nt-1.13□□□□□ -2.59
SEC4P07560 YNL266WYNL266W 420 nt-1.13□□□□□ -2.59
SEC4P07560 YNL277W-AYNL277W-A 189 nt-1.13□□□□□ -2.59
SEC4P07560 YOR170WYOR170W 306 nt-1.13□□□□□ -2.59
SEC4P07560 PMP2YEL017C-A 132 nt-1.14□□□□□ -2.59
SEC4P07560 YGR146C-AYGR146C-A 162 nt-1.14□□□□□ -2.59
SEC4P07560 GIM4YEL003W 336 nt-1.16□□□□□ -2.6
SEC4P07560 YFL019CYFL019C 354 nt-1.16□□□□□ -2.6
SEC4P07560 snR161snR161 161 nt-1.17□□□□□ -2.6
SEC4P07560 YOR329W-AYOR329W-A 210 nt-1.22□□□□□ -2.6
SEC4P07560 Q0144Q0144 330 nt-1.23□□□□□ -2.61
SEC4P07560 YBR223W-AYBR223W-A 120 nt-1.26□□□□□ -2.61
SEC4P07560 snR67snR67 82 nt-1.28□□□□□ -2.61
SEC4P07560 tD(GUC)QtD(GUC)Q 75 nt-1.28□□□□□ -2.61
SEC4P07560 JLP2YMR132C 627 nt-1.28□□□□□ -2.61
SEC4P07560 YOL155W-AYOL155W-A 135 nt-1.3□□□□□ -2.62
SEC4P07560 YLR286W-AYLR286W-A 135 nt-1.32□□□□□ -2.62
SEC4P07560 YBR178WYBR178W 375 nt-1.34□□□□□ -2.62
SEC4P07560 tP(UGG)QtP(UGG)Q 72 nt-1.35□□□□□ -2.63
SEC4P07560 YNL097C-BYNL097C-B 123 nt-1.36□□□□□ -2.63
SEC4P07560 YNL205CYNL205C 423 nt-1.38□□□□□ -2.63
SEC4P07560 YDL159C-BYDL159C-B 177 nt-1.39□□□□□ -2.63
SEC4P07560 SKI7YOR076C 2244 nt-1.43□□□□□ -2.64
SEC4P07560 snR65snR65 100 nt-1.43□□□□□ -2.64
SEC4P07560 YOR302WYOR302W 78 nt-1.43□□□□□ -2.64
SEC4P07560 snR52snR52 92 nt-1.45□□□□□ -2.64
SEC4P07560 YOR102WYOR102W 351 nt-1.46□□□□□ -2.64
SEC4P07560 YPL152W-AYPL152W-A 99 nt-1.46□□□□□ -2.64
SEC4P07560 YGL188C-AYGL188C-A 141 nt-1.47□□□□□ -2.64
SEC4P07560 YLR342W-AYLR342W-A 174 nt-1.48□□□□□ -2.65
SEC4P07560 snR48snR48 113 nt-1.48□□□□□ -2.65
SEC4P07560 YHR175W-AYHR175W-A 150 nt-1.5□□□□□ -2.65
SEC4P07560 YNR077CYNR077C 255 nt-1.5□□□□□ -2.65
SEC4P07560 tL(UAA)QtL(UAA)Q 85 nt-1.55□□□□□ -2.66
SEC4P07560 YML054C-AYML054C-A 159 nt-1.57□□□□□ -2.66
SEC4P07560 YHL015W-AYHL015W-A 84 nt-1.58□□□□□ -2.66
SEC4P07560 YLR299C-AYLR299C-A 93 nt-1.58□□□□□ -2.66
SEC4P07560 YBR196C-AYBR196C-A 150 nt-1.63□□□□□ -2.67
SEC4P07560 snR56snR56 88 nt-1.65□□□□□ -2.67
SEC4P07560 tR(ACG)Q2tR(ACG)Q2 74 nt-1.65□□□□□ -2.67
SEC4P07560 tY(GUA)QtY(GUA)Q 84 nt-1.71□□□□□ -2.68
SEC4P07560 snR80snR80 171 nt-1.74□□□□□ -2.69
SEC4P07560 YGR240C-AYGR240C-A 201 nt-1.74□□□□□ -2.69
SEC4P07560 YOR231C-AYOR231C-A 201 nt-1.75□□□□□ -2.69
SEC4P07560 CDC65tQ(CUG)M 72 nt-1.77□□□□□ -2.69
SEC4P07560 snR77snR77 88 nt-1.83□□□□□ -2.7
SEC4P07560 YDR406W-AYDR406W-A 246 nt-1.83□□□□□ -2.7
SEC4P07560 YHR180C-BYHR180C-B 105 nt-1.83□□□□□ -2.7
SEC4P07560 YDR524W-CYDR524W-C 90 nt-1.86□□□□□ -2.71
SEC4P07560 YNL198CYNL198C 303 nt-1.88□□□□□ -2.71
SEC4P07560 YOR376W-AYOR376W-A 156 nt-1.9□□□□□ -2.71
SEC4P07560 snR81snR81 201 nt-1.91□□□□□ -2.72
SEC4P07560 YMR315W-AYMR315W-A 108 nt-1.92□□□□□ -2.72
SEC4P07560 SOM1YEL059C-A 225 nt-1.93□□□□□ -2.72
SEC4P07560 YJL150WYJL150W 303 nt-1.97□□□□□ -2.72
SEC4P07560 YKL106C-AYKL106C-A 120 nt-2.05□□□□□ -2.74
SEC4P07560 YBL053WYBL053W 375 nt-2.05□□□□□ -2.74
SEC4P07560 YCR095W-AYCR095W-A 159 nt-2.06□□□□□ -2.74
SEC4P07560 YOR316C-AYOR316C-A 210 nt-2.09□□□□□ -2.74
SEC4P07560 RPL41AYDL184C 78 nt-2.18□□□□□ -2.76
SEC4P07560 YBR296C-AYBR296C-A 120 nt-2.2□□□□□ -2.76
SEC4P07560 YBR109W-AYBR109W-A 225 nt-2.25□□□□□ -2.77
SEC4P07560 YMR046W-AYMR046W-A 129 nt-2.27□□□□□ -2.77
SEC4P07560 YGR151CYGR151C 336 nt-2.28□□□□□ -2.77
SEC4P07560 YOL083C-AYOL083C-A 141 nt-2.29□□□□□ -2.78
SEC4P07560 YOR309CYOR309C 381 nt-2.29□□□□□ -2.78
SEC4P07560 YBR126W-BYBR126W-B 144 nt-2.38□□□□□ -2.79
SEC4P07560 YBL071C-BYBL071C-B 99 nt-2.39□□□□□ -2.79
SEC4P07560 SPG3YDR504C 384 nt-2.41□□□□□ -2.8
SEC4P07560 YOL164W-AYOL164W-A 183 nt-2.41□□□□□ -2.8
SEC4P07560 snR38snR38 95 nt-2.42□□□□□ -2.8
SEC4P07560 snR47snR47 99 nt-2.49□□□□□ -2.81
SEC4P07560 YCL001W-BYCL001W-B 255 nt-2.5□□□□□ -2.81
SEC4P07560 YBL100W-CYBL100W-C 120 nt-2.52□□□□□ -2.81
SEC4P07560 YAL037C-AYAL037C-A 93 nt-2.53□□□□□ -2.81
SEC4P07560 tM(CAU)Q1tM(CAU)Q1 76 nt-2.58□□□□□ -2.82
SEC4P07560 YLR466C-BYLR466C-B 117 nt-2.61□□□□□ -2.83
SEC4P07560 snR6snR6 112 nt-2.69□□□□□ -2.84
SEC4P07560 Q0142Q0142 177 nt-2.7□□□□□ -2.84
SEC4P07560 YNL338WYNL338W 159 nt-2.71□□□□□ -2.84
SEC4P07560 RPL41BYDL133C-A 78 nt-2.73□□□□□ -2.85
SEC4P07560 YNL337WYNL337W 255 nt-2.78□□□□□ -2.85
SEC4P07560 YOR335W-AYOR335W-A 81 nt-2.79□□□□□ -2.86
SEC4P07560 YKL225WYKL225W 348 nt-2.8□□□□□ -2.86
SEC4P07560 tS(GCU)Q1tS(GCU)Q1 86 nt-2.81□□□□□ -2.86
SEC4P07560 snR73snR73 106 nt-2.86□□□□□ -2.87
SEC4P07560 YDL114W-AYDL114W-A 114 nt-2.87□□□□□ -2.87
SEC4P07560 YDR543CYDR543C 300 nt-2.9□□□□□ -2.87
SEC4P07560 snR85snR85 171 nt-2.97□□□□□ -2.88
SEC4P07560 tV(UAC)QtV(UAC)Q 76 nt-2.97□□□□□ -2.88
SEC4P07560 YGL041C-BYGL041C-B 183 nt-3.05□□□□□ -2.9
SEC4P07560 YDR034C-AYDR034C-A 177 nt-3.1□□□□□ -2.91
SEC4P07560 YNL103W-AYNL103W-A 90 nt-3.18□□□□□ -2.92
SEC4P07560 snR61snR61 90 nt-3.2□□□□□ -2.92
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms