Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.88■□□□□ 0.45
GYPBP06028 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.88■□□□□ 0.45
GYPBP06028 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.88■□□□□ 0.45
GYPBP06028 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
GYPBP06028 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
GYPBP06028 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
GYPBP06028 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GYPBP06028 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.87■□□□□ 0.45
GYPBP06028 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.87■□□□□ 0.45
GYPBP06028 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
GYPBP06028 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.87■□□□□ 0.45
GYPBP06028 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.87■□□□□ 0.45
GYPBP06028 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
GYPBP06028 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
GYPBP06028 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
GYPBP06028 TREX1-205ENST00000625293 1783 ntBASIC17.86■□□□□ 0.45
GYPBP06028 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.86■□□□□ 0.45
GYPBP06028 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.86■□□□□ 0.45
GYPBP06028 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.86■□□□□ 0.45
GYPBP06028 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.86■□□□□ 0.45
GYPBP06028 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.86■□□□□ 0.45
GYPBP06028 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.86■□□□□ 0.45
GYPBP06028 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.86■□□□□ 0.45
GYPBP06028 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
GYPBP06028 AC093484.2-201ENST00000580996 2166 ntBASIC17.86■□□□□ 0.45
GYPBP06028 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
GYPBP06028 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.85■□□□□ 0.45
GYPBP06028 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
GYPBP06028 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.85■□□□□ 0.45
GYPBP06028 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
GYPBP06028 AC034268.1-201ENST00000441047 882 ntBASIC17.85■□□□□ 0.45
GYPBP06028 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.85■□□□□ 0.45
GYPBP06028 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
GYPBP06028 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 AL020996.1-203ENST00000536896 2307 ntBASIC17.84■□□□□ 0.45
GYPBP06028 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
GYPBP06028 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 AC018445.3-201ENST00000624177 1945 ntBASIC17.84■□□□□ 0.45
GYPBP06028 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GYPBP06028 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
GYPBP06028 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.84■□□□□ 0.45
GYPBP06028 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.84■□□□□ 0.45
GYPBP06028 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
GYPBP06028 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
GYPBP06028 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.84■□□□□ 0.45
GYPBP06028 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
GYPBP06028 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms