Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.04■■□□□ 1.44
CHGBP05060 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.04■■□□□ 1.44
CHGBP05060 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CHGBP05060 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
CHGBP05060 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CHGBP05060 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
CHGBP05060 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.03■■□□□ 1.44
CHGBP05060 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC24.03■■□□□ 1.44
CHGBP05060 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CHGBP05060 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CHGBP05060 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.03■■□□□ 1.44
CHGBP05060 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC24.03■■□□□ 1.44
CHGBP05060 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC24.03■■□□□ 1.44
CHGBP05060 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC24.03■■□□□ 1.44
CHGBP05060 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.03■■□□□ 1.44
CHGBP05060 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
CHGBP05060 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHGBP05060 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
CHGBP05060 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC24.02■■□□□ 1.44
CHGBP05060 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CHGBP05060 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 MTDHP1-201ENST00000605323 784 ntBASIC24.02■■□□□ 1.44
CHGBP05060 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.02■■□□□ 1.44
CHGBP05060 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC24.02■■□□□ 1.44
CHGBP05060 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CHGBP05060 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.02■■□□□ 1.44
CHGBP05060 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CHGBP05060 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CHGBP05060 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CHGBP05060 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.01■■□□□ 1.43
CHGBP05060 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.01■■□□□ 1.43
CHGBP05060 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC24.01■■□□□ 1.43
CHGBP05060 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC24.01■■□□□ 1.43
CHGBP05060 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHGBP05060 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.01■■□□□ 1.43
CHGBP05060 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.01■■□□□ 1.43
CHGBP05060 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CHGBP05060 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CHGBP05060 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24■■□□□ 1.43
CHGBP05060 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24■■□□□ 1.43
CHGBP05060 MOK-225ENST00000522867 1883 ntTSL 5 BASIC24■■□□□ 1.43
CHGBP05060 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 ME2-218ENST00000640965 2476 ntTSL 5 BASIC24■■□□□ 1.43
CHGBP05060 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24■■□□□ 1.43
CHGBP05060 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24■■□□□ 1.43
CHGBP05060 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24■■□□□ 1.43
CHGBP05060 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24■■□□□ 1.43
CHGBP05060 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24■■□□□ 1.43
CHGBP05060 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24■■□□□ 1.43
CHGBP05060 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CHGBP05060 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CHGBP05060 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24■■□□□ 1.43
CHGBP05060 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24■■□□□ 1.43
CHGBP05060 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CHGBP05060 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24■■□□□ 1.43
CHGBP05060 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHGBP05060 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHGBP05060 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHGBP05060 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.99■■□□□ 1.43
CHGBP05060 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.99■■□□□ 1.43
CHGBP05060 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHGBP05060 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.99■■□□□ 1.43
CHGBP05060 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.99■■□□□ 1.43
CHGBP05060 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.99■■□□□ 1.43
CHGBP05060 RN7SL471P-201ENST00000580476 299 ntBASIC23.99■■□□□ 1.43
CHGBP05060 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.99■■□□□ 1.43
CHGBP05060 AL023875.1-201ENST00000640777 796 ntBASIC23.99■■□□□ 1.43
CHGBP05060 TCF3P1-201ENST00000423021 1937 ntBASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms