Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND3P03897 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-ND3P03897 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MT-ND3P03897 TMEM179-206ENST00000616017 1645 ntBASIC20.25■□□□□ 0.83
MT-ND3P03897 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND3P03897 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MT-ND3P03897 AC007322.1-201ENST00000426983 750 ntBASIC20.25■□□□□ 0.83
MT-ND3P03897 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND3P03897 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-ND3P03897 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.25■□□□□ 0.83
MT-ND3P03897 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.25■□□□□ 0.83
MT-ND3P03897 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.25■□□□□ 0.83
MT-ND3P03897 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-ND3P03897 MYCNOS-205ENST00000641950 531 ntBASIC20.25■□□□□ 0.83
MT-ND3P03897 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.25■□□□□ 0.83
MT-ND3P03897 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MT-ND3P03897 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.24■□□□□ 0.83
MT-ND3P03897 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MT-ND3P03897 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MT-ND3P03897 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.24■□□□□ 0.83
MT-ND3P03897 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.24■□□□□ 0.83
MT-ND3P03897 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
MT-ND3P03897 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MT-ND3P03897 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
MT-ND3P03897 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MT-ND3P03897 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 AC010141.2-201ENST00000452426 721 ntBASIC20.23■□□□□ 0.83
MT-ND3P03897 AC098818.2-201ENST00000564925 2320 ntBASIC20.23■□□□□ 0.83
MT-ND3P03897 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.23■□□□□ 0.83
MT-ND3P03897 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MT-ND3P03897 AL691432.2-201ENST00000607222 2038 ntBASIC20.23■□□□□ 0.83
MT-ND3P03897 AL121832.2-201ENST00000610979 668 ntBASIC20.23■□□□□ 0.83
MT-ND3P03897 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MT-ND3P03897 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
MT-ND3P03897 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-ND3P03897 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
MT-ND3P03897 KRT8P36-201ENST00000489121 1440 ntBASIC20.22■□□□□ 0.83
MT-ND3P03897 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 AL355802.2-201ENST00000402069 882 ntBASIC20.22■□□□□ 0.83
MT-ND3P03897 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.22■□□□□ 0.83
MT-ND3P03897 DUX4L16-201ENST00000555130 1264 ntBASIC20.22■□□□□ 0.83
MT-ND3P03897 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
MT-ND3P03897 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.22■□□□□ 0.83
MT-ND3P03897 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
MT-ND3P03897 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.22■□□□□ 0.83
MT-ND3P03897 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MT-ND3P03897 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
MT-ND3P03897 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
MT-ND3P03897 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND3P03897 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND3P03897 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.21■□□□□ 0.83
MT-ND3P03897 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND3P03897 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-ND3P03897 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-ND3P03897 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.21■□□□□ 0.83
MT-ND3P03897 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MT-ND3P03897 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.21■□□□□ 0.83
MT-ND3P03897 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
MT-ND3P03897 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MT-ND3P03897 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms