Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZBED1O96006 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ZBED1O96006 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ZBED1O96006 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.06■□□□□ 0.96
ZBED1O96006 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 SMG8-203ENST00000578922 2178 ntBASIC21.06■□□□□ 0.96
ZBED1O96006 ABHD17AP1-201ENST00000358206 933 ntBASIC21.06■□□□□ 0.96
ZBED1O96006 HLA-G-202ENST00000376815 851 ntBASIC21.06■□□□□ 0.96
ZBED1O96006 HLA-G-203ENST00000376818 1127 ntBASIC21.06■□□□□ 0.96
ZBED1O96006 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.06■□□□□ 0.96
ZBED1O96006 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.06■□□□□ 0.96
ZBED1O96006 AL031963.3-201ENST00000606441 850 ntBASIC21.06■□□□□ 0.96
ZBED1O96006 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
ZBED1O96006 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
ZBED1O96006 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ZBED1O96006 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ZBED1O96006 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.06■□□□□ 0.96
ZBED1O96006 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ZBED1O96006 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 KRT8P20-201ENST00000423953 1409 ntBASIC21.05■□□□□ 0.96
ZBED1O96006 KRT8P17-201ENST00000453110 1448 ntBASIC21.05■□□□□ 0.96
ZBED1O96006 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.05■□□□□ 0.96
ZBED1O96006 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.05■□□□□ 0.96
ZBED1O96006 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.05■□□□□ 0.96
ZBED1O96006 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.05■□□□□ 0.96
ZBED1O96006 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.05■□□□□ 0.96
ZBED1O96006 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.05■□□□□ 0.96
ZBED1O96006 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZBED1O96006 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.05■□□□□ 0.96
ZBED1O96006 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ZBED1O96006 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
ZBED1O96006 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.04■□□□□ 0.96
ZBED1O96006 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.04■□□□□ 0.96
ZBED1O96006 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.04■□□□□ 0.96
ZBED1O96006 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.04■□□□□ 0.96
ZBED1O96006 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.04■□□□□ 0.96
ZBED1O96006 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.04■□□□□ 0.96
ZBED1O96006 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZBED1O96006 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.03■□□□□ 0.96
ZBED1O96006 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.03■□□□□ 0.96
ZBED1O96006 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.03■□□□□ 0.96
ZBED1O96006 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ZBED1O96006 AC008687.6-201ENST00000596318 630 ntBASIC21.03■□□□□ 0.96
ZBED1O96006 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.03■□□□□ 0.96
ZBED1O96006 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.03■□□□□ 0.96
ZBED1O96006 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZBED1O96006 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZBED1O96006 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZBED1O96006 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.02■□□□□ 0.96
ZBED1O96006 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms