Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDRT1O95170 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.76■□□□□ 0.43
CDRT1O95170 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.75■□□□□ 0.43
CDRT1O95170 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.75■□□□□ 0.43
CDRT1O95170 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.75■□□□□ 0.43
CDRT1O95170 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.75■□□□□ 0.43
CDRT1O95170 AC061975.6-201ENST00000579045 1553 ntBASIC17.75■□□□□ 0.43
CDRT1O95170 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDRT1O95170 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDRT1O95170 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.75■□□□□ 0.43
CDRT1O95170 MIR572-201ENST00000384983 95 ntBASIC17.75■□□□□ 0.43
CDRT1O95170 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.75■□□□□ 0.43
CDRT1O95170 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDRT1O95170 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CDRT1O95170 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.74■□□□□ 0.43
CDRT1O95170 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.74■□□□□ 0.43
CDRT1O95170 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.74■□□□□ 0.43
CDRT1O95170 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CDRT1O95170 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
CDRT1O95170 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDRT1O95170 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.73■□□□□ 0.43
CDRT1O95170 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 EDA-201ENST00000338901 1233 ntBASIC17.73■□□□□ 0.43
CDRT1O95170 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.73■□□□□ 0.43
CDRT1O95170 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.73■□□□□ 0.43
CDRT1O95170 AF213884.3-201ENST00000563833 479 ntBASIC17.73■□□□□ 0.43
CDRT1O95170 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CDRT1O95170 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDRT1O95170 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CDRT1O95170 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.73■□□□□ 0.43
CDRT1O95170 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.73■□□□□ 0.43
CDRT1O95170 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT1O95170 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
CDRT1O95170 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.72■□□□□ 0.43
CDRT1O95170 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CDRT1O95170 DPP3P2-201ENST00000416030 1696 ntBASIC17.72■□□□□ 0.43
CDRT1O95170 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.72■□□□□ 0.43
CDRT1O95170 RASA4CP-201ENST00000424092 1398 ntBASIC17.72■□□□□ 0.43
CDRT1O95170 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.72■□□□□ 0.43
CDRT1O95170 AL355001.2-201ENST00000620617 1191 ntBASIC17.72■□□□□ 0.43
CDRT1O95170 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CDRT1O95170 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.72■□□□□ 0.43
CDRT1O95170 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CDRT1O95170 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CDRT1O95170 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms