Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PFDN1O60925 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.89■□□□□ 0.45
PFDN1O60925 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.89■□□□□ 0.45
PFDN1O60925 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PFDN1O60925 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.89■□□□□ 0.45
PFDN1O60925 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PFDN1O60925 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.88■□□□□ 0.45
PFDN1O60925 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
PFDN1O60925 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 DUX4L29-201ENST00000425409 679 ntBASIC17.88■□□□□ 0.45
PFDN1O60925 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PFDN1O60925 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.88■□□□□ 0.45
PFDN1O60925 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 NFIC-211ENST00000641145 8399 ntBASIC17.88■□□□□ 0.45
PFDN1O60925 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
PFDN1O60925 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PFDN1O60925 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PFDN1O60925 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 AC121338.2-201ENST00000622535 1744 ntBASIC17.87■□□□□ 0.45
PFDN1O60925 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PFDN1O60925 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.87■□□□□ 0.45
PFDN1O60925 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.87■□□□□ 0.45
PFDN1O60925 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PFDN1O60925 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.87■□□□□ 0.45
PFDN1O60925 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PFDN1O60925 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PFDN1O60925 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PFDN1O60925 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
PFDN1O60925 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.86■□□□□ 0.45
PFDN1O60925 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PFDN1O60925 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L13-201ENST00000554103 1267 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 AP006261.1-201ENST00000584783 668 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 AC044849.2-201ENST00000606596 710 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L15-201ENST00000611059 1267 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L23-201ENST00000615195 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L24-201ENST00000617576 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L22-201ENST00000618238 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L20-201ENST00000619712 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L21-201ENST00000622058 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L10-201ENST00000622460 1267 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DUX4L25-201ENST00000624915 1269 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 AC131274.2-201ENST00000580697 1507 ntBASIC17.86■□□□□ 0.45
PFDN1O60925 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
PFDN1O60925 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
PFDN1O60925 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PFDN1O60925 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms