Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HCN1O60741 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.59■□□□□ 0.57
HCN1O60741 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.59■□□□□ 0.57
HCN1O60741 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.59■□□□□ 0.57
HCN1O60741 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
HCN1O60741 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HCN1O60741 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCN1O60741 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.57
HCN1O60741 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HCN1O60741 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
HCN1O60741 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
HCN1O60741 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.58■□□□□ 0.57
HCN1O60741 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
HCN1O60741 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCN1O60741 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCN1O60741 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
HCN1O60741 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HCN1O60741 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.58■□□□□ 0.57
HCN1O60741 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.58■□□□□ 0.57
HCN1O60741 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HCN1O60741 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.58■□□□□ 0.56
HCN1O60741 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.58■□□□□ 0.56
HCN1O60741 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
HCN1O60741 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HCN1O60741 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.58■□□□□ 0.56
HCN1O60741 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 CYP21A1P-202ENST00000354927 1481 ntBASIC18.58■□□□□ 0.56
HCN1O60741 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.58■□□□□ 0.56
HCN1O60741 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HCN1O60741 AL162377.1-201ENST00000618844 1793 ntBASIC18.58■□□□□ 0.56
HCN1O60741 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
HCN1O60741 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
HCN1O60741 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.57■□□□□ 0.56
HCN1O60741 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.57■□□□□ 0.56
HCN1O60741 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.57■□□□□ 0.56
HCN1O60741 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HCN1O60741 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.57■□□□□ 0.56
HCN1O60741 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.57■□□□□ 0.56
HCN1O60741 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HCN1O60741 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HCN1O60741 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
HCN1O60741 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HCN1O60741 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HCN1O60741 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
HCN1O60741 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.56■□□□□ 0.56
HCN1O60741 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 AL512408.1-201ENST00000569378 2000 ntBASIC18.56■□□□□ 0.56
HCN1O60741 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.56■□□□□ 0.56
HCN1O60741 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.56■□□□□ 0.56
HCN1O60741 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.56■□□□□ 0.56
HCN1O60741 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.56■□□□□ 0.56
HCN1O60741 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.56■□□□□ 0.56
HCN1O60741 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.56■□□□□ 0.56
HCN1O60741 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.56■□□□□ 0.56
HCN1O60741 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 AC092720.2-201ENST00000602388 1665 ntBASIC18.56■□□□□ 0.56
HCN1O60741 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HCN1O60741 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.56■□□□□ 0.56
HCN1O60741 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
HCN1O60741 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.55■□□□□ 0.56
HCN1O60741 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HCN1O60741 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.55■□□□□ 0.56
HCN1O60741 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
HCN1O60741 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms