Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.99■□□□□ 0.31
SSNA1O43805 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 KRT18P60-201ENST00000312876 1297 ntBASIC16.99■□□□□ 0.31
SSNA1O43805 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 PVT1_1.1-201ENST00000615125 194 ntBASIC16.99■□□□□ 0.31
SSNA1O43805 AC074183.2-201ENST00000623112 922 ntBASIC16.99■□□□□ 0.31
SSNA1O43805 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
SSNA1O43805 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 AC020916.1-201ENST00000587762 1774 ntBASIC16.99■□□□□ 0.31
SSNA1O43805 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.99■□□□□ 0.31
SSNA1O43805 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 PCDHB18P-201ENST00000524813 2368 ntBASIC16.99■□□□□ 0.31
SSNA1O43805 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSNA1O43805 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.98■□□□□ 0.31
SSNA1O43805 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.98■□□□□ 0.31
SSNA1O43805 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SSNA1O43805 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.98■□□□□ 0.31
SSNA1O43805 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.98■□□□□ 0.31
SSNA1O43805 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.98■□□□□ 0.31
SSNA1O43805 AC137630.3-201ENST00000607245 391 ntBASIC16.98■□□□□ 0.31
SSNA1O43805 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSNA1O43805 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SSNA1O43805 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SSNA1O43805 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSNA1O43805 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSNA1O43805 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
SSNA1O43805 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.97■□□□□ 0.31
SSNA1O43805 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC16.97■□□□□ 0.31
SSNA1O43805 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.97■□□□□ 0.31
SSNA1O43805 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 pRNA.6-201ENST00000610482 90 ntBASIC16.97■□□□□ 0.31
SSNA1O43805 pRNA.5-201ENST00000612139 90 ntBASIC16.97■□□□□ 0.31
SSNA1O43805 pRNA.11-201ENST00000618423 90 ntBASIC16.97■□□□□ 0.31
SSNA1O43805 pRNA.13-201ENST00000619112 90 ntBASIC16.97■□□□□ 0.31
SSNA1O43805 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.97■□□□□ 0.31
SSNA1O43805 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.97■□□□□ 0.31
SSNA1O43805 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SSNA1O43805 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SSNA1O43805 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SSNA1O43805 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.97■□□□□ 0.31
SSNA1O43805 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SSNA1O43805 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSNA1O43805 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSNA1O43805 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.96■□□□□ 0.31
SSNA1O43805 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.96■□□□□ 0.31
SSNA1O43805 AC241377.3-202ENST00000626088 1088 ntBASIC16.96■□□□□ 0.31
SSNA1O43805 AC241585.3-202ENST00000628937 1088 ntBASIC16.96■□□□□ 0.31
SSNA1O43805 AC245100.8-202ENST00000629247 1058 ntBASIC16.96■□□□□ 0.31
SSNA1O43805 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.96■□□□□ 0.31
SSNA1O43805 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSNA1O43805 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SSNA1O43805 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SSNA1O43805 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.96■□□□□ 0.31
SSNA1O43805 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SSNA1O43805 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSNA1O43805 AL390961.4-201ENST00000623958 2535 ntBASIC16.96■□□□□ 0.3
SSNA1O43805 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSNA1O43805 AL691432.2-201ENST00000607222 2038 ntBASIC16.96■□□□□ 0.3
SSNA1O43805 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSNA1O43805 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
SSNA1O43805 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.95■□□□□ 0.3
SSNA1O43805 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSNA1O43805 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.95■□□□□ 0.3
SSNA1O43805 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.95■□□□□ 0.3
SSNA1O43805 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms