Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC069152.1-201ENST00000438030 544 ntBASIC18.92■□□□□ 0.62
PROM1O43490 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.92■□□□□ 0.62
PROM1O43490 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.92■□□□□ 0.62
PROM1O43490 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PROM1O43490 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PROM1O43490 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PROM1O43490 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PROM1O43490 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.92■□□□□ 0.62
PROM1O43490 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PROM1O43490 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.92■□□□□ 0.62
PROM1O43490 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PROM1O43490 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.92■□□□□ 0.62
PROM1O43490 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.91■□□□□ 0.62
PROM1O43490 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 HLA-G-202ENST00000376815 851 ntBASIC18.91■□□□□ 0.62
PROM1O43490 HLA-G-203ENST00000376818 1127 ntBASIC18.91■□□□□ 0.62
PROM1O43490 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.91■□□□□ 0.62
PROM1O43490 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.91■□□□□ 0.62
PROM1O43490 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.91■□□□□ 0.62
PROM1O43490 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.91■□□□□ 0.62
PROM1O43490 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.91■□□□□ 0.62
PROM1O43490 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.91■□□□□ 0.62
PROM1O43490 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PROM1O43490 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PROM1O43490 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.91■□□□□ 0.62
PROM1O43490 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PROM1O43490 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.9■□□□□ 0.62
PROM1O43490 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 TCF3P1-201ENST00000423021 1937 ntBASIC18.9■□□□□ 0.62
PROM1O43490 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PROM1O43490 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PROM1O43490 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.9■□□□□ 0.62
PROM1O43490 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.9■□□□□ 0.62
PROM1O43490 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PROM1O43490 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.9■□□□□ 0.62
PROM1O43490 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PROM1O43490 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.9■□□□□ 0.62
PROM1O43490 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.89■□□□□ 0.61
PROM1O43490 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.89■□□□□ 0.61
PROM1O43490 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.89■□□□□ 0.61
PROM1O43490 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.89■□□□□ 0.61
PROM1O43490 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.89■□□□□ 0.61
PROM1O43490 AC083880.1-201ENST00000608266 535 ntBASIC18.89■□□□□ 0.61
PROM1O43490 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PROM1O43490 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PROM1O43490 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 AL691432.2-201ENST00000607222 2038 ntBASIC18.88■□□□□ 0.61
PROM1O43490 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PROM1O43490 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.88■□□□□ 0.61
PROM1O43490 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.88■□□□□ 0.61
PROM1O43490 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PROM1O43490 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.88■□□□□ 0.61
PROM1O43490 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.88■□□□□ 0.61
PROM1O43490 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms