Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 AP005212.1-201ENST00000581547 1997 ntBASIC21.37■■□□□ 1.01
SPTLC1O15269 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPTLC1O15269 PKD1P6-201ENST00000343738 4769 ntBASIC21.37■■□□□ 1.01
SPTLC1O15269 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.37■■□□□ 1.01
SPTLC1O15269 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 KRASP1-201ENST00000407852 552 ntBASIC21.36■■□□□ 1.01
SPTLC1O15269 AC239809.2-201ENST00000415381 517 ntBASIC21.36■■□□□ 1.01
SPTLC1O15269 AC133681.1-201ENST00000465482 601 ntBASIC21.36■■□□□ 1.01
SPTLC1O15269 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.36■■□□□ 1.01
SPTLC1O15269 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPTLC1O15269 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.36■■□□□ 1.01
SPTLC1O15269 FEM1AP1-201ENST00000431297 1995 ntBASIC21.36■■□□□ 1.01
SPTLC1O15269 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.35■■□□□ 1.01
SPTLC1O15269 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.35■■□□□ 1.01
SPTLC1O15269 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPTLC1O15269 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SPTLC1O15269 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 ECEL1P3-201ENST00000427961 737 ntBASIC21.34■■□□□ 1.01
SPTLC1O15269 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SPTLC1O15269 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SPTLC1O15269 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.34■■□□□ 1.01
SPTLC1O15269 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
SPTLC1O15269 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.34■■□□□ 1.01
SPTLC1O15269 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.34■■□□□ 1.01
SPTLC1O15269 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
SPTLC1O15269 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
SPTLC1O15269 AC092667.1-201ENST00000434301 2586 ntBASIC21.34■■□□□ 1.01
SPTLC1O15269 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPTLC1O15269 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SPTLC1O15269 AL512408.1-201ENST00000569378 2000 ntBASIC21.33■■□□□ 1.01
SPTLC1O15269 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.33■■□□□ 1.01
SPTLC1O15269 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SPTLC1O15269 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.33■■□□□ 1.01
SPTLC1O15269 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.33■■□□□ 1.01
SPTLC1O15269 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.33■■□□□ 1.01
SPTLC1O15269 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SPTLC1O15269 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.33■■□□□ 1.01
SPTLC1O15269 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.33■■□□□ 1.01
SPTLC1O15269 MIR4497-201ENST00000583208 89 ntBASIC21.33■■□□□ 1.01
SPTLC1O15269 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
SPTLC1O15269 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.33■■□□□ 1
SPTLC1O15269 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
SPTLC1O15269 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SPTLC1O15269 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms