Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC026396.1-201ENST00000419388 421 ntBASIC19.33■□□□□ 0.68
CDX4O14627 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.33■□□□□ 0.68
CDX4O14627 FAM86EP-206ENST00000510506 987 ntBASIC19.33■□□□□ 0.68
CDX4O14627 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 AC130371.2-201ENST00000619443 611 ntBASIC19.33■□□□□ 0.68
CDX4O14627 AP006587.1-201ENST00000534129 1502 ntBASIC19.33■□□□□ 0.68
CDX4O14627 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.33■□□□□ 0.68
CDX4O14627 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CDX4O14627 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.33■□□□□ 0.68
CDX4O14627 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDX4O14627 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CDX4O14627 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 PCED1CP-201ENST00000419887 785 ntBASIC19.32■□□□□ 0.68
CDX4O14627 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.32■□□□□ 0.68
CDX4O14627 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 SLC25A1P4-201ENST00000567977 778 ntBASIC19.32■□□□□ 0.68
CDX4O14627 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.32■□□□□ 0.68
CDX4O14627 AP000692.2-201ENST00000608391 879 ntBASIC19.32■□□□□ 0.68
CDX4O14627 AC131212.4-201ENST00000623606 975 ntBASIC19.32■□□□□ 0.68
CDX4O14627 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
CDX4O14627 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDX4O14627 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CDX4O14627 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.31■□□□□ 0.68
CDX4O14627 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 AC242852.2-201ENST00000615738 1807 ntBASIC19.31■□□□□ 0.68
CDX4O14627 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.31■□□□□ 0.68
CDX4O14627 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDX4O14627 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CDX4O14627 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.31■□□□□ 0.68
CDX4O14627 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CDX4O14627 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 FAM207BP-201ENST00000447172 505 ntBASIC19.3■□□□□ 0.68
CDX4O14627 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.3■□□□□ 0.68
CDX4O14627 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CDX4O14627 COX11P1-201ENST00000489116 835 ntBASIC19.3■□□□□ 0.68
CDX4O14627 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.3■□□□□ 0.68
CDX4O14627 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.3■□□□□ 0.68
CDX4O14627 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.3■□□□□ 0.68
CDX4O14627 AC116562.4-202ENST00000641738 218 ntBASIC19.3■□□□□ 0.68
CDX4O14627 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.3■□□□□ 0.68
CDX4O14627 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDX4O14627 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.29■□□□□ 0.68
CDX4O14627 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.29■□□□□ 0.68
CDX4O14627 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CDX4O14627 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 AL450487.1-201ENST00000426799 995 ntBASIC19.29■□□□□ 0.68
CDX4O14627 AC092647.4-201ENST00000457211 535 ntBASIC19.29■□□□□ 0.68
CDX4O14627 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.29■□□□□ 0.68
CDX4O14627 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.29■□□□□ 0.68
CDX4O14627 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.29■□□□□ 0.68
CDX4O14627 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.29■□□□□ 0.68
CDX4O14627 AL121956.5-201ENST00000625261 221 ntBASIC19.29■□□□□ 0.68
CDX4O14627 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CDX4O14627 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDX4O14627 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDX4O14627 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
CDX4O14627 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDX4O14627 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDX4O14627 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CDX4O14627 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.28■□□□□ 0.68
CDX4O14627 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.28■□□□□ 0.68
CDX4O14627 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDX4O14627 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms