Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCDC66A2RUB6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 LINC02228-203ENST00000641970 1355 ntBASIC21.48■■□□□ 1.03
CCDC66A2RUB6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.48■■□□□ 1.03
CCDC66A2RUB6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 AC099778.1-201ENST00000568593 1911 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 AC116050.2-201ENST00000612102 1779 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L2-201ENST00000561772 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L6-201ENST00000626483 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L1-201ENST00000627662 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L8-201ENST00000629013 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L3-201ENST00000630187 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L7-201ENST00000630678 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 DUX4L5-201ENST00000630834 1275 ntBASIC21.47■■□□□ 1.03
CCDC66A2RUB6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC66A2RUB6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 AC105265.2-201ENST00000467189 838 ntBASIC21.46■■□□□ 1.03
CCDC66A2RUB6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC66A2RUB6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
CCDC66A2RUB6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC66A2RUB6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC66A2RUB6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms