Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TCRBV4S1A1TA0A5B7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.01■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 AC066615.1-201ENST00000640911 628 ntBASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TCRBV4S1A1TA0A5B7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TCRBV4S1A1TA0A5B7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms