Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 AFG3L1P-217ENST00000557444 2447 ntBASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC026185.1-201ENST00000445748 174 ntBASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC093787.1-201ENST00000450396 207 ntBASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC092437.1-201ENST00000624794 1048 ntBASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRBV6-4A0A1B0GX49 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 MIR935-201ENST00000401179 91 ntBASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 AF201337.1-201ENST00000520239 748 ntBASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRBV6-4A0A1B0GX49 MKRN4P-201ENST00000444706 1521 ntBASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC009237.14-201ENST00000609975 1594 ntBASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 CDCA4P2-201ENST00000441182 718 ntBASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRBV6-4A0A1B0GX49 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 KRT17P1-201ENST00000399211 1546 ntBASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 AP001271.2-201ENST00000624018 1556 ntBASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC105036.2-201ENST00000569468 176 ntBASIC14.05□□□□□ -0.16
TRBV6-4A0A1B0GX49 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms