Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 RBM17P1-201ENST00000453646 1190 ntBASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 CR392000.1-201ENST00000624770 1228 ntBASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV17A0A0B4J275 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 KRT16P1-201ENST00000399124 1418 ntBASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 KRT16P6-202ENST00000425692 1426 ntBASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 REXO1L10P-201ENST00000615707 1290 ntBASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 AC006128.1-201ENST00000624704 1661 ntBASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV17A0A0B4J275 AC005229.4-201ENST00000610085 2198 ntBASIC18.08■□□□□ 0.49
TRAV17A0A0B4J275 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV17A0A0B4J275 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV17A0A0B4J275 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 DPP3P2-201ENST00000416030 1696 ntBASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV17A0A0B4J275 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 AC079834.2-201ENST00000609776 1949 ntBASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV17A0A0B4J275 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 RCN1P1-201ENST00000400413 996 ntBASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 AC116562.2-201ENST00000507042 360 ntBASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV17A0A0B4J275 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV17A0A0B4J275 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV17A0A0B4J275 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV17A0A0B4J275 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms