Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AL162430.1-201ENST00000480705 870 ntBASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CYP2T3P-201ENST00000601990 817 ntBASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AL031963.3-201ENST00000606441 850 ntBASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 OR10C1-204ENST00000622521 1039 ntBASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KRT8P20-201ENST00000423953 1409 ntBASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-8A0A0A6YYG3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PTBP1P-201ENST00000554374 1601 ntBASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AL589743.5-201ENST00000616611 1050 ntBASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-8A0A0A6YYG3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HLA-G-202ENST00000376815 851 ntBASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HLA-G-203ENST00000376818 1127 ntBASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 AC125437.2-201ENST00000625180 2167 ntBASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV6-8A0A0A6YYG3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-8A0A0A6YYG3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-8A0A0A6YYG3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-8A0A0A6YYG3 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-8A0A0A6YYG3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms