Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.16■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 AC060766.5-201ENST00000590539 871 ntBASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 HLA-B-256ENST00000639848 1089 ntBASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.15■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TNFSF12-TNFSF13A0A0A6YY99 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PRORSD1P-201ENST00000295112 541 ntBASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 AC005829.2-201ENST00000571422 1056 ntBASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 AC008687.6-201ENST00000596318 630 ntBASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.14■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 AL390719.1-204ENST00000412397 1219 ntBASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 AC026366.1-201ENST00000488803 879 ntBASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 KRT16P6-202ENST00000425692 1426 ntBASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.12■□□□□ 0.49
TNFSF12-TNFSF13A0A0A6YY99 AP003097.1-201ENST00000530657 1135 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms