Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.35■■■□□ 2.13
CDH23Q9H251 AL035685.1-201ENST00000636663 812 ntBASIC28.35■■■□□ 2.13
CDH23Q9H251 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.35■■■□□ 2.13
CDH23Q9H251 AC019069.1-201ENST00000610008 1333 ntBASIC28.35■■■□□ 2.13
CDH23Q9H251 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.34■■■□□ 2.13
CDH23Q9H251 RARRES2P1-201ENST00000474487 481 ntBASIC28.34■■■□□ 2.13
CDH23Q9H251 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.34■■■□□ 2.13
CDH23Q9H251 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDH23Q9H251 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CDH23Q9H251 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
CDH23Q9H251 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDH23Q9H251 AL592295.1-201ENST00000400984 884 ntBASIC28.33■■■□□ 2.13
CDH23Q9H251 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
CDH23Q9H251 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CDH23Q9H251 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CDH23Q9H251 MTURN-203ENST00000409688 843 ntTSL 2 BASIC28.32■■■□□ 2.12
CDH23Q9H251 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
CDH23Q9H251 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CDH23Q9H251 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CDH23Q9H251 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CDH23Q9H251 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CDH23Q9H251 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CDH23Q9H251 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.25■■■□□ 2.11
CDH23Q9H251 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDH23Q9H251 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CDH23Q9H251 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CDH23Q9H251 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.22■■■□□ 2.11
CDH23Q9H251 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.22■■■□□ 2.11
CDH23Q9H251 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.21■■■□□ 2.11
CDH23Q9H251 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.21■■■□□ 2.11
CDH23Q9H251 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.2■■■□□ 2.11
CDH23Q9H251 U85056.1-201ENST00000616429 682 ntBASIC28.2■■■□□ 2.11
CDH23Q9H251 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.2■■■□□ 2.1
CDH23Q9H251 AC022413.1-201ENST00000624602 984 ntBASIC28.2■■■□□ 2.1
CDH23Q9H251 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.19■■■□□ 2.1
CDH23Q9H251 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.19■■■□□ 2.1
CDH23Q9H251 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDH23Q9H251 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CDH23Q9H251 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CDH23Q9H251 AC004987.1-201ENST00000428627 508 ntBASIC28.16■■■□□ 2.1
CDH23Q9H251 KRT18P60-201ENST00000312876 1297 ntBASIC28.16■■■□□ 2.1
CDH23Q9H251 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CDH23Q9H251 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.16■■■□□ 2.1
CDH23Q9H251 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.15■■■□□ 2.1
CDH23Q9H251 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.15■■■□□ 2.1
CDH23Q9H251 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.15■■■□□ 2.1
CDH23Q9H251 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.14■■■□□ 2.1
CDH23Q9H251 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.14■■■□□ 2.1
CDH23Q9H251 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
CDH23Q9H251 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CDH23Q9H251 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CDH23Q9H251 ATP5G2P3-201ENST00000429083 425 ntBASIC28.13■■■□□ 2.09
CDH23Q9H251 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDH23Q9H251 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.11■■■□□ 2.09
CDH23Q9H251 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CDH23Q9H251 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDH23Q9H251 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CDH23Q9H251 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CDH23Q9H251 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CDH23Q9H251 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CDH23Q9H251 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDH23Q9H251 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CDH23Q9H251 AL451085.2-201ENST00000605085 799 ntBASIC28.08■■■□□ 2.09
CDH23Q9H251 LINC00273-201ENST00000539813 1452 ntBASIC28.07■■■□□ 2.08
CDH23Q9H251 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC28.07■■■□□ 2.08
CDH23Q9H251 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.07■■■□□ 2.08
CDH23Q9H251 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.07■■■□□ 2.08
CDH23Q9H251 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDH23Q9H251 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDH23Q9H251 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.05■■■□□ 2.08
CDH23Q9H251 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.05■■■□□ 2.08
CDH23Q9H251 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
CDH23Q9H251 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDH23Q9H251 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.05■■■□□ 2.08
CDH23Q9H251 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDH23Q9H251 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.03■■■□□ 2.08
CDH23Q9H251 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDH23Q9H251 AC060814.1-201ENST00000554326 538 ntBASIC28.02■■■□□ 2.08
CDH23Q9H251 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC28.02■■■□□ 2.08
CDH23Q9H251 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.02■■■□□ 2.08
CDH23Q9H251 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDH23Q9H251 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.01■■■□□ 2.07
CDH23Q9H251 HES4-202ENST00000428771 1040 ntTSL 2 BASIC28.01■■■□□ 2.07
CDH23Q9H251 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28■■■□□ 2.07
CDH23Q9H251 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28■■■□□ 2.07
CDH23Q9H251 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDH23Q9H251 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDH23Q9H251 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.97■■■□□ 2.07
CDH23Q9H251 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDH23Q9H251 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDH23Q9H251 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDH23Q9H251 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CDH23Q9H251 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.95■■■□□ 2.06
CDH23Q9H251 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.94■■■□□ 2.06
CDH23Q9H251 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
CDH23Q9H251 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CDH23Q9H251 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.93■■■□□ 2.06
CDH23Q9H251 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
CDH23Q9H251 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
CDH23Q9H251 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.91■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms