Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.02■■□□□ 1.12
Cdca3Q99M54 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdca3Q99M54 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdca3Q99M54 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdca3Q99M54 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdca3Q99M54 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Cdca3Q99M54 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdca3Q99M54 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdca3Q99M54 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.98■■□□□ 1.11
Cdca3Q99M54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdca3Q99M54 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdca3Q99M54 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Cdca3Q99M54 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdca3Q99M54 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Cdca3Q99M54 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdca3Q99M54 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.95■■□□□ 1.1
Cdca3Q99M54 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Cdca3Q99M54 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdca3Q99M54 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdca3Q99M54 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.95■■□□□ 1.1
Cdca3Q99M54 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdca3Q99M54 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdca3Q99M54 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Cdca3Q99M54 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cdca3Q99M54 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdca3Q99M54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdca3Q99M54 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdca3Q99M54 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdca3Q99M54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdca3Q99M54 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdca3Q99M54 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdca3Q99M54 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdca3Q99M54 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.88■■□□□ 1.09
Cdca3Q99M54 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdca3Q99M54 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.88■■□□□ 1.09
Cdca3Q99M54 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdca3Q99M54 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdca3Q99M54 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdca3Q99M54 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdca3Q99M54 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cdca3Q99M54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdca3Q99M54 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdca3Q99M54 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cdca3Q99M54 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdca3Q99M54 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cdca3Q99M54 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdca3Q99M54 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdca3Q99M54 Gm11599-201ENSMUST00000118720 878 ntBASIC21.85■■□□□ 1.09
Cdca3Q99M54 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Cdca3Q99M54 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdca3Q99M54 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cdca3Q99M54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
Cdca3Q99M54 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdca3Q99M54 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdca3Q99M54 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdca3Q99M54 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdca3Q99M54 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
Cdca3Q99M54 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdca3Q99M54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdca3Q99M54 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdca3Q99M54 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdca3Q99M54 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cdca3Q99M54 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.8■■□□□ 1.08
Cdca3Q99M54 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.8■■□□□ 1.08
Cdca3Q99M54 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdca3Q99M54 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdca3Q99M54 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdca3Q99M54 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.79■■□□□ 1.08
Cdca3Q99M54 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Cdca3Q99M54 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdca3Q99M54 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdca3Q99M54 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
Cdca3Q99M54 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.77■■□□□ 1.08
Cdca3Q99M54 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cdca3Q99M54 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Cdca3Q99M54 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdca3Q99M54 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdca3Q99M54 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Cdca3Q99M54 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Cdca3Q99M54 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdca3Q99M54 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdca3Q99M54 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.74■■□□□ 1.07
Cdca3Q99M54 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.74■■□□□ 1.07
Cdca3Q99M54 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdca3Q99M54 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Cdca3Q99M54 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdca3Q99M54 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.72■■□□□ 1.07
Cdca3Q99M54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdca3Q99M54 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdca3Q99M54 Mir6538-201ENSMUST00000183713 110 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms