Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox21Q811W0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox21Q811W0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox21Q811W0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox21Q811W0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sox21Q811W0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox21Q811W0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox21Q811W0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.45■□□□□ 0.7
Sox21Q811W0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox21Q811W0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox21Q811W0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sox21Q811W0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox21Q811W0 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.44■□□□□ 0.7
Sox21Q811W0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sox21Q811W0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox21Q811W0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox21Q811W0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox21Q811W0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox21Q811W0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox21Q811W0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox21Q811W0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
Sox21Q811W0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox21Q811W0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.41■□□□□ 0.7
Sox21Q811W0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox21Q811W0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sox21Q811W0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox21Q811W0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox21Q811W0 Gm11599-201ENSMUST00000118720 878 ntBASIC19.39■□□□□ 0.69
Sox21Q811W0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox21Q811W0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox21Q811W0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.39■□□□□ 0.69
Sox21Q811W0 Gm30023-201ENSMUST00000197970 889 ntBASIC19.39■□□□□ 0.69
Sox21Q811W0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox21Q811W0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox21Q811W0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox21Q811W0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox21Q811W0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox21Q811W0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.37■□□□□ 0.69
Sox21Q811W0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox21Q811W0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox21Q811W0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.36■□□□□ 0.69
Sox21Q811W0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox21Q811W0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox21Q811W0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox21Q811W0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
Sox21Q811W0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.35■□□□□ 0.69
Sox21Q811W0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox21Q811W0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox21Q811W0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox21Q811W0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sox21Q811W0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox21Q811W0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox21Q811W0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.33■□□□□ 0.69
Sox21Q811W0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sox21Q811W0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.33■□□□□ 0.68
Sox21Q811W0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox21Q811W0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sox21Q811W0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox21Q811W0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sox21Q811W0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox21Q811W0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.31■□□□□ 0.68
Sox21Q811W0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox21Q811W0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox21Q811W0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox21Q811W0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox21Q811W0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox21Q811W0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox21Q811W0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox21Q811W0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox21Q811W0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox21Q811W0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox21Q811W0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sox21Q811W0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sox21Q811W0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox21Q811W0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox21Q811W0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox21Q811W0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sox21Q811W0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sox21Q811W0 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.25■□□□□ 0.67
Sox21Q811W0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox21Q811W0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sox21Q811W0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sox21Q811W0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sox21Q811W0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sox21Q811W0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox21Q811W0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.23■□□□□ 0.67
Sox21Q811W0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sox21Q811W0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox21Q811W0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox21Q811W0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sox21Q811W0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sox21Q811W0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sox21Q811W0 Gm11175-201ENSMUST00000116172 543 ntBASIC19.21■□□□□ 0.67
Sox21Q811W0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.21■□□□□ 0.67
Sox21Q811W0 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms