Protein–RNA interactions for Protein: P50875

SPT20, Transcription factor SPT20, yeastyeast

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT20P50875 KRR1YCL059C 951 nt7.99□□□□□ -1.13
SPT20P50875 TIP1YBR067C 633 nt7.99□□□□□ -1.13
SPT20P50875 NBA1YOL070C 1506 nt7.98□□□□□ -1.13
SPT20P50875 SAC7YDR389W 1965 nt7.98□□□□□ -1.13
SPT20P50875 MCM5YLR274W 2328 nt7.97□□□□□ -1.13
SPT20P50875 DTR1YBR180W 1719 nt7.95□□□□□ -1.14
SPT20P50875 IGD1YFR017C 588 nt7.95□□□□□ -1.14
SPT20P50875 OPI3YJR073C 621 nt7.95□□□□□ -1.14
SPT20P50875 RPC31YNL151C 756 nt7.95□□□□□ -1.14
SPT20P50875 KRE1YNL322C 942 nt7.95□□□□□ -1.14
SPT20P50875 SLG1YOR008C 1137 nt7.95□□□□□ -1.14
SPT20P50875 HEM14YER014W 1620 nt7.95□□□□□ -1.14
SPT20P50875 SNX3YOR357C 489 nt7.94□□□□□ -1.14
SPT20P50875 AGP3YFL055W 1677 nt7.93□□□□□ -1.14
SPT20P50875 CDD1YLR245C 429 nt7.92□□□□□ -1.14
SPT20P50875 YNR064CYNR064C 873 nt7.92□□□□□ -1.14
SPT20P50875 PET20YPL159C 762 nt7.92□□□□□ -1.14
SPT20P50875 RIM2YBR192W 1134 nt7.92□□□□□ -1.14
SPT20P50875 YTH1YPR107C 627 nt7.91□□□□□ -1.14
SPT20P50875 ENO2YHR174W 1314 nt7.91□□□□□ -1.14
SPT20P50875 TOK1YJL093C 2076 nt7.91□□□□□ -1.14
SPT20P50875 YMR265CYMR265C 1386 nt7.9□□□□□ -1.14
SPT20P50875 NAS2YIL007C 663 nt7.9□□□□□ -1.14
SPT20P50875 SKG1YKR100C 1068 nt7.9□□□□□ -1.14
SPT20P50875 AMF1YOR378W 1548 nt7.89□□□□□ -1.15
SPT20P50875 YDR510C-AYDR510C-A 117 nt7.89□□□□□ -1.15
SPT20P50875 THP3YPR045C 1413 nt7.88□□□□□ -1.15
SPT20P50875 snR78snR78 87 nt7.88□□□□□ -1.15
SPT20P50875 INH1YDL181W 258 nt7.88□□□□□ -1.15
SPT20P50875 RPN14YGL004C 1254 nt7.88□□□□□ -1.15
SPT20P50875 UFD1YGR048W 1086 nt7.88□□□□□ -1.15
SPT20P50875 FSH2YMR222C 672 nt7.88□□□□□ -1.15
SPT20P50875 DPL1YDR294C 1770 nt7.88□□□□□ -1.15
SPT20P50875 ELO1YJL196C 933 nt7.87□□□□□ -1.15
SPT20P50875 MIM1YOL026C 342 nt7.87□□□□□ -1.15
SPT20P50875 SPE2YOL052C 1191 nt7.87□□□□□ -1.15
SPT20P50875 HAP5YOR358W 729 nt7.87□□□□□ -1.15
SPT20P50875 KEL3YPL263C 1956 nt7.86□□□□□ -1.15
SPT20P50875 tA(AGC)DtA(AGC)D 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)FtA(AGC)F 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)GtA(AGC)G 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)HtA(AGC)H 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)JtA(AGC)J 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)K1tA(AGC)K1 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)K2tA(AGC)K2 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)LtA(AGC)L 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)M1tA(AGC)M1 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)M2tA(AGC)M2 73 nt7.85□□□□□ -1.15
SPT20P50875 tA(AGC)PtA(AGC)P 73 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)BtD(GUC)B 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)DtD(GUC)D 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)G1tD(GUC)G1 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)G2tD(GUC)G2 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)I1tD(GUC)I1 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)I2tD(GUC)I2 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)J1tD(GUC)J1 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)J2tD(GUC)J2 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)J3tD(GUC)J3 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)J4tD(GUC)J4 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)KtD(GUC)K 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)L1tD(GUC)L1 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)L2tD(GUC)L2 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)MtD(GUC)M 72 nt7.85□□□□□ -1.15
SPT20P50875 tD(GUC)OtD(GUC)O 72 nt7.85□□□□□ -1.15
SPT20P50875 TPC1YGR096W 945 nt7.85□□□□□ -1.15
SPT20P50875 BNS1YGR230W 414 nt7.85□□□□□ -1.15
SPT20P50875 IPL1YPL209C 1104 nt7.85□□□□□ -1.15
SPT20P50875 MAS1YLR163C 1389 nt7.84□□□□□ -1.15
SPT20P50875 FIT1YDR534C 1587 nt7.84□□□□□ -1.15
SPT20P50875 LEU2YCL018W 1095 nt7.84□□□□□ -1.15
SPT20P50875 SUV3YPL029W 2214 nt7.84□□□□□ -1.15
SPT20P50875 LPD1YFL018C 1500 nt7.83□□□□□ -1.16
SPT20P50875 YCR025CYCR025C 411 nt7.83□□□□□ -1.16
SPT20P50875 LEU4YNL104C 1860 nt7.82□□□□□ -1.16
SPT20P50875 snR31snR31 225 nt7.82□□□□□ -1.16
SPT20P50875 FLX1YIL134W 936 nt7.81□□□□□ -1.16
SPT20P50875 YRF1-3YGR296W 5580 nt7.81□□□□□ -1.16
SPT20P50875 YRF1-6YNL339C 5580 nt7.81□□□□□ -1.16
SPT20P50875 YRF1-7YPL283C 5580 nt7.81□□□□□ -1.16
SPT20P50875 HBS1YKR084C 1836 nt7.8□□□□□ -1.16
SPT20P50875 YIL177CYIL177C 5277 nt7.8□□□□□ -1.16
SPT20P50875 YCP4YCR004C 744 nt7.8□□□□□ -1.16
SPT20P50875 SWT21YNL187W 1074 nt7.79□□□□□ -1.16
SPT20P50875 RSC4YKR008W 1878 nt7.79□□□□□ -1.16
SPT20P50875 YDR467CYDR467C 327 nt7.78□□□□□ -1.16
SPT20P50875 PHB2YGR231C 933 nt7.78□□□□□ -1.16
SPT20P50875 ADH3YMR083W 1128 nt7.78□□□□□ -1.16
SPT20P50875 FET5YFL041W 1869 nt7.77□□□□□ -1.17
SPT20P50875 NAM8YHR086W 1572 nt7.77□□□□□ -1.17
SPT20P50875 YCR099CYCR099C 468 nt7.77□□□□□ -1.17
SPT20P50875 REC114YMR133W 1287 nt7.77□□□□□ -1.17
SPT20P50875 SFL1YOR140W 2301 nt7.77□□□□□ -1.17
SPT20P50875 TPN1YGL186C 1740 nt7.76□□□□□ -1.17
SPT20P50875 tE(CUC)DtE(CUC)D 72 nt7.76□□□□□ -1.17
SPT20P50875 tE(CUC)ItE(CUC)I 72 nt7.76□□□□□ -1.17
SPT20P50875 MOB1YIL106W 945 nt7.76□□□□□ -1.17
SPT20P50875 YKR012CYKR012C 378 nt7.76□□□□□ -1.17
SPT20P50875 CRC1YOR100C 984 nt7.76□□□□□ -1.17
SPT20P50875 DUR3YHL016C 2208 nt7.75□□□□□ -1.17
SPT20P50875 CYC3YAL039C 810 nt7.75□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms