Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC108673.1-201ENST00000510422 1159 ntBASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.78■□□□□ 0.92
TCRBV4S1A1TA0A5B7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV4S1A1TA0A5B7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TCRBV4S1A1TA0A5B7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV4S1A1TA0A5B7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV4S1A1TA0A5B7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV4S1A1TA0A5B7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TCRBV4S1A1TA0A5B7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TCRBV4S1A1TA0A5B7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.75■□□□□ 0.91
TCRBV4S1A1TA0A5B7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TCRBV4S1A1TA0A5B7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
TCRBV4S1A1TA0A5B7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV4S1A1TA0A5B7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TCRBV4S1A1TA0A5B7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV4S1A1TA0A5B7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV4S1A1TA0A5B7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV4S1A1TA0A5B7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV4S1A1TA0A5B7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV4S1A1TA0A5B7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV4S1A1TA0A5B7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TCRBV4S1A1TA0A5B7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV4S1A1TA0A5B7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV4S1A1TA0A5B7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV4S1A1TA0A5B7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TCRBV4S1A1TA0A5B7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV4S1A1TA0A5B7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBV4S1A1TA0A5B7 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBV4S1A1TA0A5B7 MIR6090-201ENST00000622481 60 ntBASIC20.69■□□□□ 0.9
TCRBV4S1A1TA0A5B7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.69■□□□□ 0.9
TCRBV4S1A1TA0A5B7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TCRBV4S1A1TA0A5B7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV4S1A1TA0A5B7 AC021231.2-201ENST00000594613 730 ntBASIC20.68■□□□□ 0.9
TCRBV4S1A1TA0A5B7 HLA-V-202ENST00000446817 847 ntBASIC20.67■□□□□ 0.9
TCRBV4S1A1TA0A5B7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV4S1A1TA0A5B7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV4S1A1TA0A5B7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV4S1A1TA0A5B7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV4S1A1TA0A5B7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TCRBV4S1A1TA0A5B7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TCRBV4S1A1TA0A5B7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.65■□□□□ 0.9
TCRBV4S1A1TA0A5B7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.64■□□□□ 0.89
TCRBV4S1A1TA0A5B7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.64■□□□□ 0.89
TCRBV4S1A1TA0A5B7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TCRBV4S1A1TA0A5B7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TCRBV4S1A1TA0A5B7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TCRBV4S1A1TA0A5B7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV4S1A1TA0A5B7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TCRBV4S1A1TA0A5B7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TCRBV4S1A1TA0A5B7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV4S1A1TA0A5B7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TCRBV4S1A1TA0A5B7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.6■□□□□ 0.89
TCRBV4S1A1TA0A5B7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TCRBV4S1A1TA0A5B7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 AC142086.6-201ENST00000621154 1765 ntBASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.59■□□□□ 0.89
TCRBV4S1A1TA0A5B7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV4S1A1TA0A5B7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TCRBV4S1A1TA0A5B7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TCRBV4S1A1TA0A5B7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.58■□□□□ 0.89
TCRBV4S1A1TA0A5B7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TCRBV4S1A1TA0A5B7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV4S1A1TA0A5B7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
TCRBV4S1A1TA0A5B7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TCRBV4S1A1TA0A5B7 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.56■□□□□ 0.88
TCRBV4S1A1TA0A5B7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TCRBV4S1A1TA0A5B7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TCRBV4S1A1TA0A5B7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV4S1A1TA0A5B7 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TCRBV4S1A1TA0A5B7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TCRBV4S1A1TA0A5B7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 649.9 ms