Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC226101.1-201ENST00000401483 387 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AL353692.2-201ENST00000407054 335 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 PPIAP30-201ENST00000415473 519 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC005515.1-201ENST00000456368 289 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 RN7SL180P-201ENST00000466769 294 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC079944.1-201ENST00000485426 495 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC008496.1-201ENST00000509131 295 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 CIR1P1-201ENST00000524055 1133 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AP005597.2-201ENST00000526238 341 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 MRPL45P2-203ENST00000573318 473 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC097376.1-201ENST00000602907 997 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC009974.1-201ENST00000608881 455 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC140725.3-201ENST00000616193 880 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 MIR6829-201ENST00000620375 67 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 AC013437.2-201ENST00000639587 677 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 LINC01616-201ENST00000561816 2280 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 SAMMSON-203ENST00000641005 2168 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 SPATA31C2-201ENST00000324915 3777 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 UG0898H09-202ENST00000623646 7040 ntBASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.64□□□□□ -1.19
PPARGC1AQ9UBK2 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC100810.3-201ENST00000633189 2240 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RNU1-38P-201ENST00000362817 144 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RNA5SP238-201ENST00000365464 120 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 MIR122-201ENST00000385044 85 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RNU2-5P-201ENST00000410533 180 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC106883.1-201ENST00000418805 562 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 FTOP1-201ENST00000419363 861 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AL390840.1-201ENST00000420303 988 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 NPM1P48-201ENST00000436002 853 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 FDPSP8-201ENST00000438304 1089 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 OR13C1P-201ENST00000457612 963 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RPS14P7-201ENST00000473701 448 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC008040.4-201ENST00000494834 768 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RN7SL182P-201ENST00000496499 300 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC117422.1-201ENST00000508263 379 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 ENPP7P3-201ENST00000509123 241 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 RN7SKP253-201ENST00000516424 309 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 MTND2P32-201ENST00000521584 1038 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 BMS1P15-201ENST00000554269 1141 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 UBE2CP4-201ENST00000561405 535 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC008507.2-201ENST00000588402 1176 ntBASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.63□□□□□ -1.19
PPARGC1AQ9UBK2 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms