Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.9□□□□□ -1.31
VMP1Q96GC9 AL157713.1-201ENST00000379752 1531 ntBASIC6.9□□□□□ -1.31
VMP1Q96GC9 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.9□□□□□ -1.31
VMP1Q96GC9 AC022306.1-201ENST00000560489 1562 ntBASIC6.9□□□□□ -1.31
VMP1Q96GC9 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.9□□□□□ -1.31
VMP1Q96GC9 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
VMP1Q96GC9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC008957.3-201ENST00000624112 2242 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AL390840.1-201ENST00000420303 988 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 VDAC2P3-201ENST00000430995 828 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 NIP7P1-201ENST00000433227 512 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC105052.2-201ENST00000434317 794 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 RN7SL688P-201ENST00000471754 275 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 RN7SL751P-201ENST00000473281 284 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC005017.1-201ENST00000482002 490 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 RN7SKP233-201ENST00000517005 110 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 EIF4EP5-201ENST00000528228 640 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC073488.7-201ENST00000633785 778 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 AC069222.1-201ENST00000608028 3360 ntBASIC6.89□□□□□ -1.31
VMP1Q96GC9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
VMP1Q96GC9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VMP1Q96GC9 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AP003471.1-202ENST00000319051 1988 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC005034.3-201ENST00000604845 1747 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AL021877.2-201ENST00000624442 10684 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 WNK1-220ENST00000574564 1401 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 RNU1-24P-201ENST00000364285 165 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 PPIAP26-201ENST00000377951 522 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC009413.1-201ENST00000414823 399 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AL354983.1-201ENST00000434580 906 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 RPL5P4-201ENST00000434805 886 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC008620.1-201ENST00000468453 592 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 RPS14P7-201ENST00000473701 448 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 AC120057.1-201ENST00000483947 663 ntBASIC6.88□□□□□ -1.31
VMP1Q96GC9 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.88□□□□□ -1.31
VMP1Q96GC9 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms