Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 OR5M2P-202ENST00000641241 4242 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 OR7E25P-202ENST00000641088 5937 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AL359694.1-201ENST00000403247 604 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC002127.1-201ENST00000421305 225 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 GAPDHP57-201ENST00000424400 585 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC083862.1-201ENST00000427378 1242 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 COX4I1P2-201ENST00000447446 547 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC094085.1-201ENST00000468914 584 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AL390198.2-201ENST00000510553 222 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SNED1Q8TER0 SNORA81.2-201ENST00000516868 170 ntBASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.29□□□□□ -1.08
SNED1Q8TER0 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 MAPK10-377ENST00000642006 2752 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC079061.1-201ENST00000499579 3075 ntTSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 MRPS6P2-201ENST00000381143 370 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 RPL5P5-201ENST00000392009 893 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 GSTA6P-201ENST00000424144 582 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 RPL5P34-201ENST00000426545 891 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 RPL5P9-201ENST00000448118 886 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 RN7SL569P-201ENST00000494652 288 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC002310.3-201ENST00000569728 723 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC133552.4-201ENST00000576103 676 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC005899.3-201ENST00000580360 271 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AL589743.6-201ENST00000611025 117 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 Six3os1_1.1-201ENST00000620900 87 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC008691.1-209ENST00000642094 814 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 AC020658.2-201ENST00000559030 4020 ntBASIC8.28□□□□□ -1.08
SNED1Q8TER0 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
SNED1Q8TER0 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SNED1Q8TER0 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
SNED1Q8TER0 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.08
SNED1Q8TER0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.08
SNED1Q8TER0 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC8.27□□□□□ -1.08
SNED1Q8TER0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 VPS13D-212ENST00000543766 3838 ntTSL 2 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.27□□□□□ -1.09
SNED1Q8TER0 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
SNED1Q8TER0 RN7SKP108-201ENST00000411367 328 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms