Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 EMC3-AS1-205ENST00000438698 534 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 AL590004.3-202ENST00000445883 451 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 RPL7L1P11-201ENST00000446092 721 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 RN7SL369P-201ENST00000477138 299 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 RN7SL284P-201ENST00000498823 275 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC11.91□□□□□ -0.5
SMARCA4P51532 PVT1-214ENST00000522875 922 ntTSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AC027369.2-201ENST00000528030 440 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC11.91□□□□□ -0.5
SMARCA4P51532 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC11.91□□□□□ -0.5
SMARCA4P51532 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMARCA4P51532 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMARCA4P51532 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SMARCA4P51532 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SMARCA4P51532 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AC006213.1-202ENST00000589021 2176 ntTSL 2 BASIC11.9□□□□□ -0.5
SMARCA4P51532 AC087392.3-202ENST00000358446 1754 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC11.9□□□□□ -0.5
SMARCA4P51532 AC091305.2-201ENST00000624049 1576 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC11.9□□□□□ -0.5
SMARCA4P51532 MTND6P12-201ENST00000428247 522 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 CDY8P-201ENST00000428380 1279 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 AC010240.2-201ENST00000445363 1205 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 CDY20P-201ENST00000447528 1279 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC11.9□□□□□ -0.5
SMARCA4P51532 AC020978.7-201ENST00000575953 1187 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC11.9□□□□□ -0.5
SMARCA4P51532 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC11.9□□□□□ -0.5
SMARCA4P51532 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC11.9□□□□□ -0.5
SMARCA4P51532 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMARCA4P51532 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMARCA4P51532 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMARCA4P51532 AC104837.1-201ENST00000444644 1587 ntBASIC11.9□□□□□ -0.5
SMARCA4P51532 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
SMARCA4P51532 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 RPL31-202ENST00000409000 641 ntTSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 SLC20A1P1-201ENST00000413906 956 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 BMS1P13-201ENST00000417301 885 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AC079355.1-201ENST00000421770 223 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 CLUHP1-201ENST00000435012 1190 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 BMS1P10-201ENST00000443754 1120 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 RPL19P11-201ENST00000495944 589 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 REV3L-214ENST00000619481 969 ntTSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 YTHDC2-201ENST00000161863 6316 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
SMARCA4P51532 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 SEC31B-201ENST00000370345 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 MICAL2-203ENST00000379612 6625 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 FNDC3A-206ENST00000541916 6328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 OR8J1-201ENST00000303039 1074 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SMARCA4P51532 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC11.89□□□□□ -0.51
SMARCA4P51532 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC11.89□□□□□ -0.51
SMARCA4P51532 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC11.89□□□□□ -0.51
SMARCA4P51532 NXT1P1-201ENST00000458481 316 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 LDHAP1-201ENST00000509421 992 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AC006499.4-201ENST00000510947 694 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC11.89□□□□□ -0.51
SMARCA4P51532 PRMT5P1-201ENST00000514351 598 ntBASIC11.89□□□□□ -0.51
SMARCA4P51532 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC11.89□□□□□ -0.51
SMARCA4P51532 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC11.89□□□□□ -0.51
SMARCA4P51532 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SMARCA4P51532 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SMARCA4P51532 ZNF791-201ENST00000343325 4554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SMARCA4P51532 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SMARCA4P51532 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SMARCA4P51532 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SMARCA4P51532 HCG18-244ENST00000602516 2890 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 PCDHA10-203ENST00000562220 12358 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 SUGT1P2-201ENST00000379452 992 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC11.88□□□□□ -0.51
SMARCA4P51532 RBMY2AP-201ENST00000445405 1157 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC11.88□□□□□ -0.51
SMARCA4P51532 RBMY2CP-201ENST00000448575 1157 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 RBMY2DP-202ENST00000448881 1157 ntBASIC11.88□□□□□ -0.51
SMARCA4P51532 RBMY2BP-202ENST00000451071 1156 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms