Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 LINC00494-201ENST00000416742 3544 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
PSEN1P49768 NLRP1-217ENST00000619223 4698 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
PSEN1P49768 CYP4A11-203ENST00000371905 1725 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
PSEN1P49768 ICA1-205ENST00000401396 1742 ntTSL 5 BASIC10.02□□□□□ -0.8
PSEN1P49768 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 SMAD9-203ENST00000399275 5389 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 ZNF766-206ENST00000599581 2065 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 NUP85-203ENST00000540768 1926 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 ATP5O-201ENST00000290299 932 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 RNU6-1309P-201ENST00000363305 108 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 RNY3P3-201ENST00000363816 102 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 BPIFA3-202ENST00000375454 1116 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 RN7SKP32-201ENST00000410167 303 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 RN7SKP279-201ENST00000411383 298 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC010385.1-201ENST00000412374 256 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 MRPS18BP1-201ENST00000414228 192 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC073136.2-201ENST00000417282 849 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 AL157895.1-203ENST00000423551 708 ntTSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 EIF1P3-201ENST00000423841 334 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 PGAM1P6-201ENST00000425684 747 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 PTMAP4-201ENST00000426188 346 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC10.02□□□□□ -0.81
PSEN1P49768 ADGRF5P1-201ENST00000435875 1135 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 IFNWP18-201ENST00000437472 591 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 HSPE1P28-201ENST00000443139 211 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 IFNWP9-201ENST00000448683 591 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 Y_RNA.631-201ENST00000459607 101 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 DMKN-237ENST00000472252 593 ntAPPRIS ALT2 TSL 3 BASIC10.02□□□□□ -0.81
PSEN1P49768 RN7SL822P-201ENST00000475674 296 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC107398.1-201ENST00000486904 505 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AP005202.1-201ENST00000489915 867 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 IBA57-AS1-202ENST00000496552 594 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 AC093809.1-201ENST00000509155 340 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC104136.1-201ENST00000512969 394 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC026801.2-201ENST00000515352 425 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC233724.2-201ENST00000515727 271 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 IGLV3-13-201ENST00000518475 223 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 AC011726.2-201ENST00000522547 508 ntTSL 3 BASIC10.02□□□□□ -0.81
PSEN1P49768 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 AL354919.2-201ENST00000527035 537 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 AP001767.1-201ENST00000530976 286 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 DERA-209ENST00000532964 854 ntTSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC10.02□□□□□ -0.81
PSEN1P49768 SQSTM1P1-201ENST00000603451 859 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC009027.1-201ENST00000604510 479 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 uc_338.5-201ENST00000611839 155 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 ADAM6-202ENST00000616762 999 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
PSEN1P49768 AL139093.1-201ENST00000622029 1014 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AP000769.3-201ENST00000622944 536 ntTSL 3 BASIC10.02□□□□□ -0.81
PSEN1P49768 AC139792.3-201ENST00000623525 224 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 AC105133.2-201ENST00000624158 461 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 CU638689.4-203ENST00000625185 785 ntTSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC10.02□□□□□ -0.81
PSEN1P49768 ANKRD62P1-201ENST00000434304 1623 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 CCDC90B-214ENST00000529689 4014 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 PRDM10-201ENST00000304538 5817 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 CBWD1-204ENST00000377447 2513 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 SPIN4-201ENST00000374884 4117 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
PSEN1P49768 RAD17-205ENST00000354868 3060 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC10.02□□□□□ -0.81
PSEN1P49768 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 PTPRD-207ENST00000463477 1697 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 AP000350.7-201ENST00000624923 8030 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 EEF1A1P42-201ENST00000613436 1331 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 TMOD3-201ENST00000308580 8255 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 SCRN1-201ENST00000242059 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 QTRT2-201ENST00000281273 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 ANKRD26P2-201ENST00000445530 1710 ntBASIC10.02□□□□□ -0.81
PSEN1P49768 SV2C-202ENST00000502798 11035 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
PSEN1P49768 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PSEN1P49768 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PSEN1P49768 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PSEN1P49768 NPHP1-202ENST00000355301 1932 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PSEN1P49768 KNOP1P5-201ENST00000358374 1378 ntBASIC10.01□□□□□ -0.81
PSEN1P49768 ARMC8-218ENST00000485396 1920 ntTSL 2 BASIC10.01□□□□□ -0.81
PSEN1P49768 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC10.01□□□□□ -0.81
PSEN1P49768 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms