Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDX1P47902 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDX1P47902 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDX1P47902 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CDX1P47902 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CDX1P47902 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC5.86□□□□□ -1.47
CDX1P47902 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CDX1P47902 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDX1P47902 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 UGT2B27P-201ENST00000505092 1620 ntBASIC5.85□□□□□ -1.47
CDX1P47902 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 RNF19BPY-201ENST00000458209 1550 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AL022323.4-201ENST00000623980 13120 ntBASIC5.85□□□□□ -1.47
CDX1P47902 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 DDX50P1-201ENST00000438163 2400 ntBASIC5.85□□□□□ -1.47
CDX1P47902 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 AC005618.1-201ENST00000606901 3148 ntBASIC5.85□□□□□ -1.47
CDX1P47902 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDX1P47902 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDX1P47902 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDX1P47902 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 AC023141.10-201ENST00000415634 200 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AC244505.2-201ENST00000435089 759 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 PMS2P9-201ENST00000441237 515 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.85□□□□□ -1.47
CDX1P47902 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CDX1P47902 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 DKK2-202ENST00000510463 908 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 SCARNA20.1-201ENST00000516009 138 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AC022784.5-201ENST00000522241 437 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 HNRNPCP8-201ENST00000528764 888 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AC087257.2-201ENST00000538759 928 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 RNASE11-206ENST00000553849 1101 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC5.85□□□□□ -1.47
CDX1P47902 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 AC137735.1-201ENST00000581911 419 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 AC006335.3-201ENST00000613408 292 ntBASIC5.85□□□□□ -1.47
CDX1P47902 AL352984.2-202ENST00000613699 155 ntBASIC5.85□□□□□ -1.47
CDX1P47902 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 AL109924.4-201ENST00000623089 670 ntBASIC5.85□□□□□ -1.47
CDX1P47902 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC5.85□□□□□ -1.47
CDX1P47902 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 AC093297.3-201ENST00000607056 2517 ntBASIC5.85□□□□□ -1.47
CDX1P47902 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CDX1P47902 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CDX1P47902 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CDX1P47902 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.85□□□□□ -1.47
CDX1P47902 CDY5P-201ENST00000411487 1580 ntBASIC5.84□□□□□ -1.47
CDX1P47902 CDY9P-201ENST00000451397 1580 ntBASIC5.84□□□□□ -1.47
CDX1P47902 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDX1P47902 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.84□□□□□ -1.47
CDX1P47902 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.84□□□□□ -1.47
CDX1P47902 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDX1P47902 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.47
CDX1P47902 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDX1P47902 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDX1P47902 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC5.84□□□□□ -1.47
CDX1P47902 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.84□□□□□ -1.47
CDX1P47902 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDX1P47902 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDX1P47902 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDX1P47902 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDX1P47902 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.84□□□□□ -1.47
CDX1P47902 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CDX1P47902 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDX1P47902 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms