Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
COL4A5P29400 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
COL4A5P29400 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
COL4A5P29400 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.02□□□□□ -1.12
COL4A5P29400 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
COL4A5P29400 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 FAT4-201ENST00000335110 9669 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 SNORA17A-201ENST00000391185 133 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 AL929472.1-201ENST00000417484 429 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC8.02□□□□□ -1.13
COL4A5P29400 RBBP4P1-201ENST00000502424 1276 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 AC027369.2-201ENST00000528030 440 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 NPIPB14P-203ENST00000532298 987 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.02□□□□□ -1.13
COL4A5P29400 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 ULK4P1-202ENST00000565174 503 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 AC111186.1-201ENST00000604684 130 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC100767.2-201ENST00000604840 693 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.02□□□□□ -1.13
COL4A5P29400 AL121583.1-201ENST00000612444 682 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 SNORA17.5-201ENST00000630429 132 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 MAPK10-383ENST00000642032 3390 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 FMNL3-201ENST00000335154 12634 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL4A5P29400 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 OR2T1-202ENST00000642005 2104 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL4A5P29400 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 MTCO1P11-201ENST00000429111 1528 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
COL4A5P29400 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 TMC3-AS1-206ENST00000612811 2726 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 OR7E25P-201ENST00000344844 931 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC079355.1-201ENST00000421770 223 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC8.02□□□□□ -1.13
COL4A5P29400 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC8.02□□□□□ -1.13
COL4A5P29400 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC8.02□□□□□ -1.13
COL4A5P29400 CDY8P-201ENST00000428380 1279 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 CDY20P-201ENST00000447528 1279 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 RBMY3AP-201ENST00000449381 1145 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 RPS26P39-201ENST00000469206 341 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 SNX18P24-201ENST00000505249 671 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 LDHAP1-201ENST00000509421 992 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC036111.2-201ENST00000533247 901 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
COL4A5P29400 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.02□□□□□ -1.13
COL4A5P29400 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.02□□□□□ -1.13
COL4A5P29400 MIR4443-201ENST00000585052 53 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
COL4A5P29400 SAMMSON-214ENST00000641395 1264 ntBASIC8.02□□□□□ -1.13
COL4A5P29400 AC020658.2-201ENST00000559030 4020 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.01□□□□□ -1.13
COL4A5P29400 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 DISP2-201ENST00000267889 12614 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.01□□□□□ -1.13
COL4A5P29400 AC105046.1-201ENST00000566457 4997 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 AC034111.1-201ENST00000562143 3770 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC8.01□□□□□ -1.13
COL4A5P29400 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.01□□□□□ -1.13
COL4A5P29400 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
COL4A5P29400 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
COL4A5P29400 BMS1P13-201ENST00000417301 885 ntBASIC8.01□□□□□ -1.13
COL4A5P29400 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms