Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL162171.3-201ENST00000617439 3178 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 SNORD115-48-201ENST00000364764 76 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 SSX6-201ENST00000376932 562 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 MIR1204-201ENST00000408388 67 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 SNORA2C-201ENST00000408564 137 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 AL024507.1-201ENST00000412741 274 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 RPE-205ENST00000429907 925 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 ZNF965P-201ENST00000432501 817 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 MRPS21P1-201ENST00000453850 223 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 CABYRP1-201ENST00000465493 1045 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 NPM1P17-201ENST00000479221 602 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC112219.1-201ENST00000491567 947 ntTSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 MTCO3P27-201ENST00000514397 196 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC138866.1-201ENST00000514522 497 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 RNU6-334P-201ENST00000517072 102 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 IGKV2-29-201ENST00000521304 372 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 IGLVI-42-201ENST00000522485 381 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 EEF1A1P37-201ENST00000522748 715 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.33□□□□□ -1.24
COL6A2P12110 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 APOC2-204ENST00000591597 447 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC245389.2-201ENST00000616023 576 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC242843.1-201ENST00000618702 573 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AL445528.2-201ENST00000620582 470 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC006963.1-201ENST00000624003 1052 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AP003499.2-201ENST00000624100 483 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AC127071.1-201ENST00000624997 712 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 LINC01173-201ENST00000629370 331 ntTSL 3 BASIC7.33□□□□□ -1.24
COL6A2P12110 CASC19-232ENST00000641480 1244 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 AL596275.2-203ENST00000641951 371 ntBASIC7.33□□□□□ -1.24
COL6A2P12110 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL6A2P12110 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
COL6A2P12110 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL6A2P12110 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC087045.3-201ENST00000623046 2468 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 OR7A2P-201ENST00000304105 930 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 OR5E1P-201ENST00000305754 927 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 RPS24-202ENST00000372360 510 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 RNU6-40P-201ENST00000384254 107 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC7.32□□□□□ -1.24
COL6A2P12110 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL6A2P12110 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 MTND2P16-201ENST00000419987 799 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC7.32□□□□□ -1.24
COL6A2P12110 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 TXNP2-201ENST00000443918 295 ntBASIC7.32□□□□□ -1.24
COL6A2P12110 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.32□□□□□ -1.24
COL6A2P12110 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms